RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.7□□□□□ -0.38
RFC5-201ENST00000392542 APPL2Q8NEU8 664 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 RAB3IL1Q8TBN0 382 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 FBXO41Q8TF61 875 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 PRR11Q96HE9 360 aaPredicted RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 CADM1Q9BY67 442 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 KCNK4Q9NYG8 393 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 MOCS1Q9NZB8 636 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 FAM237BA0A1B0GVD1 139 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 MFSD11O43934 449 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 DAB1O75553 588 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 CAPN15O75808 1086 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 KCNE1P15382 129 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 GNAZP19086 355 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 SLC25A52Q3SY17 297 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 SV2CQ496J9 727 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 TEX44Q53QW1 395 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 XKR4Q5GH76 650 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 MROH9Q5TGP6 573 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 MARK2Q7KZI7 788 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 NUDCD3Q8IVD9 361 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 ENDOVQ8N8Q3 282 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 DENND2DQ9H6A0 471 aaPredicted RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 ARHGEF4Q9NR80 690 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 PIN4Q9Y237 131 aaKnown RBP12.7□□□□□ -0.38
RFC5-201ENST00000392542 NR2E3Q9Y5X4 410 aa12.7□□□□□ -0.38
RFC5-201ENST00000392542 CCL15-CCL14A0A0B4J2E2 113 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 WDR27A2RRH5 827 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 MBLAC1A4D2B0 266 aaPredicted RBP12.69□□□□□ -0.38
RFC5-201ENST00000392542 C2orf71A6NGG8 1288 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 E7ENQ6 273 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 FCHO1O14526 889 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 ALDH1A2O94788 518 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 F2P00734 622 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 TPBGLP0DKB5 382 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 CLNS1AP54105 237 aaKnown RBP12.69□□□□□ -0.38
RFC5-201ENST00000392542 OCRLQ01968 901 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 CHI3L2Q15782 390 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 CCL15Q16663 113 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 LRRC8BQ6P9F7 803 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 PIGZQ86VD9 579 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 OSTM1Q86WC4 334 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 ADGRF2Q8IZF7 708 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 COLGALT1Q8NBJ5 622 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 PPP1R13LQ8WUF5 828 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 MS4A4AQ96JQ5 239 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 TNIP3Q96KP6 325 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 ZNF570Q96NI8 536 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 ANKRD27Q96NW4 1050 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 NUDCD1Q96RS6 583 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 TSPAN18Q96SJ8 248 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 EIF2B3Q9NR50 452 aaKnown RBP12.69□□□□□ -0.38
RFC5-201ENST00000392542 ZNF638Q14966 1978 aaKnown RBP12.69□□□□□ -0.38
RFC5-201ENST00000392542 H3BRJ5 948 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 CYB561D2O14569 222 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 BIRC5O15392 142 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 HUS1O60921 280 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 STK10O94804 968 aaKnown RBP12.69□□□□□ -0.38
RFC5-201ENST00000392542 BPGMP07738 259 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 CDK18Q07002 472 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 ADIGQ0VDE8 80 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 OTUD1Q5VV17 481 aaPredicted RBP12.69□□□□□ -0.38
RFC5-201ENST00000392542 CES4AQ5XG92 561 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 STKLD1Q8NE28 680 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 TTC8Q8TAM2 541 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 FAM149B1Q96BN6 582 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 LGMNQ99538 433 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 GOLGA2P5Q9HBQ8 144 aa12.69□□□□□ -0.38
RFC5-201ENST00000392542 MYO18AQ92614 2054 aaKnown RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 CCDC195A0A1B0GUA6 201 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 SDR42E2A6NKP2 422 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 GSC2O15499 205 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 DYNC1LI2O43237 492 aaPredicted RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 OPHN1O60890 802 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 SNNO75324 88 aaPredicted RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 ESRRAP11474 423 aaPredicted RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 WARSP23381 471 aaKnown RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 GLUD2P49448 558 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 SLC8A3P57103 927 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 SOX4Q06945 474 aaPredicted RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 NIPAL4Q0D2K0 466 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 UBXN11Q5T124 520 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 C4orf50Q6ZRC1 276 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 PLEKHH3Q7Z736 793 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 ANKRD23Q86SG2 305 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 TTC7BQ86TV6 843 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 MAB21L3Q8N8X9 362 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 B3GALNT2Q8NCR0 500 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 NPLOC4Q8TAT6 608 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 RNF139Q8WU17 664 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 BRI3BPQ8WY22 251 aa12.68□□□□□ -0.38
RFC5-201ENST00000392542 NDRG1Q92597 394 aaKnown RBP12.68□□□□□ -0.38
RFC5-201ENST00000392542 HNRNPABQ99729 332 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms