RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ILF3Q12906 894 aaKnown RBP eCLIP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 DNASE1L3Q13609 305 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 MTMR1Q13613 665 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 PWP2Q15269 919 aaKnown RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 FCN2Q15485 313 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 CNGA3Q16281 694 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 ST3GAL2Q16842 350 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 Q5PR19 223 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 SWSAP1Q6NVH7 229 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 CLEC9AQ6UXN8 241 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZNF783Q6ZMS7 281 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 NECAB2Q7Z6G3 386 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 DDX42Q86XP3 938 aaKnown RBP eCLIP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 DDIASQ8IXT1 998 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 CLIP4Q8N3C7 705 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 OR56A3Q8NH54 315 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 TTLL2Q9BWV7 592 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 DPH1Q9BZG8 443 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 SLKQ9H2G2 1235 aaPredicted RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 SPAG4Q9NPE6 437 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 ASNSD1Q9NWL6 643 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 PIH1D1Q9NWS0 290 aaKnown RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 DONSONQ9NYP3 566 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 STEAP1Q9UHE8 339 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 LAMP3Q9UQV4 416 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 TBX22Q9Y458 520 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 SMAD5-AS1Q9Y6J3 95 aa1.73□□□□□ -2.13
RNU6-239P-201ENST00000390990 TNKSO95271 1327 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 FAM227AF5H4B4 570 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZG16O60844 167 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 CFC1BP0CG36 223 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 CFC1P0CG37 223 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 HOXD12P35452 270 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 PTDSS1P48651 473 aaKnown RBP1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 GRSF1Q12849 480 aaKnown RBP eCLIP1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 PTPN21Q16825 1174 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 INSCQ1MX18 579 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 EGFLAMQ63HQ2 1017 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 ISM2Q6H9L7 571 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 HMBOX1Q6NT76 420 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZNF771Q7L3S4 317 aaPredicted RBP1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 RHPN2Q8IUC4 686 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 KBTBD7Q8WVZ9 684 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 MAML1Q92585 1016 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 KAT2BQ92831 832 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 GJA10Q969M2 543 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 ANKRD9Q96BM1 317 aaPredicted RBP1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 MTFMTQ96DP5 389 aaKnown RBP1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 RTP4Q96DX8 246 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 DUX5Q96PT3 197 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 PPP1R9BQ96SB3 815 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 CGRRF1Q99675 332 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 SENP7Q9BQF6 1050 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 HTATIP2Q9BUP3 242 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 GTPBP4Q9BZE4 634 aaKnown RBP1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 SLC13A1Q9BZW2 595 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 TASP1Q9H6P5 420 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 CNNM1Q9NRU3 951 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 ABHD10Q9NUJ1 306 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 IPO11Q9UI26 975 aaKnown RBP1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 VPS4AQ9UN37 437 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 SLC27A6Q9Y2P4 619 aa1.72□□□□□ -2.13
RNU6-239P-201ENST00000390990 LOC102723971A0A1B0GUV8 181 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 CCP110O43303 1012 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 ITGB8P26012 769 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 KLRC1P26715 233 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 CIITAP33076 1130 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 RASSF2P50749 326 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 ITKQ08881 620 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 ACSM2AQ08AH3 577 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 SLC13A2Q13183 592 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 STK3Q13188 491 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 FGL2Q14314 439 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 KCNJ12Q14500 433 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 KIF19Q2TAC6 998 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 FNBP1LQ5T0N5 605 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 LIPMQ5VYY2 423 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 PMS2CLQ68D20 193 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 DGLUCYQ7Z3D6 616 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 KRTAP7-1Q8IUC3 87 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 OR6B3Q8NGW1 331 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 MVB12AQ96EY5 273 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 NT5C1BQ96P26 610 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 PGLYRP2Q96PD5 576 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 ACO2Q99798 780 aaKnown RBP1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 KRCC1Q9NPI7 259 aaPredicted RBP1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 FZD10Q9ULW2 581 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 STXBP5LQ9Y2K9 1186 aa1.71□□□□□ -2.14
RNU6-239P-201ENST00000390990 SPATA31A5Q5VU36 1347 aa1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 SPATA31A7Q8IWB4 1347 aa1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 A0A088AWK7 358 aa1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 A0A1W2PNU3 283 aaPredicted RBP1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 I6L893 689 aaPredicted RBP1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 RHODO00212 210 aa1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 LMX1BO60663 402 aa1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 PIAS2O75928 621 aa1.7□□□□□ -2.14
RNU6-239P-201ENST00000390990 APOHP02749 345 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms