RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 BBS9Q3SYG4 887 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 VSTM1Q6UX27 236 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 TAC4Q86UU9 113 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 VPS52Q8N1B4 723 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 CCDC110Q8TBZ0 833 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 BCAS4Q8TDM0 211 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 HTR3CQ8WXA8 447 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 SELENOSQ9BQE4 189 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 MFHAS1Q9Y4C4 1052 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 CEP350Q5VT06 3117 aa26.04■■□□□ 1.76
SHOX2-201ENST00000389589 DCLK1O15075 740 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 ALDH2P05091 517 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 OR4Q2P0C623 313 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 ATP2A2P16615 1042 aaKnown RBP26.03■■□□□ 1.76
SHOX2-201ENST00000389589 TPI1P60174 286 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 DQX1Q8TE96 717 aaKnown RBP26.03■■□□□ 1.76
SHOX2-201ENST00000389589 MRPL9Q9BYD2 267 aaKnown RBP26.03■■□□□ 1.76
SHOX2-201ENST00000389589 ABI2Q9NYB9 513 aaPredicted RBP26.03■■□□□ 1.76
SHOX2-201ENST00000389589 EURLQ9NYK6 297 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 FETUBQ9UGM5 382 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 OR6C75A6NL08 312 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 PPP1R12AO14974 1030 aaPredicted RBP26.03■■□□□ 1.76
SHOX2-201ENST00000389589 STK10O94804 968 aaKnown RBP26.03■■□□□ 1.76
SHOX2-201ENST00000389589 NR1H3Q13133 447 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 MTFR1Q15390 333 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 CCDC38Q502W7 563 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 BTBD8Q5XKL5 378 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 NPAS4Q8IUM7 802 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 PALM2Q8IXS6 379 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 FBXO36Q8NEA4 188 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 RNF208Q9H0X6 261 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 TMEM51Q9NW97 253 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 PLXNA3P51805 1871 aa26.03■■□□□ 1.76
SHOX2-201ENST00000389589 FNDC1Q4ZHG4 1894 aaPredicted RBP26.03■■□□□ 1.76
SHOX2-201ENST00000389589 TRIM66O15016 1216 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 BANF1O75531 89 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 IGLV3-25P01717 112 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 CCL5P13501 91 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 CYP2C18P33260 490 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 GLUD2P49448 558 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 GPX6P59796 221 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 MRPL58Q14197 206 aaKnown RBP26.02■■□□□ 1.76
SHOX2-201ENST00000389589 PRKD1Q15139 912 aaPredicted RBP26.02■■□□□ 1.76
SHOX2-201ENST00000389589 RASA2Q15283 850 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 ARHGEF18Q6ZSZ5 1173 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 SCN4BQ8IWT1 228 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 MCUQ8NE86 351 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 C8orf48Q96LL4 319 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 EPAS1Q99814 870 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 TKTL2Q9H0I9 626 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 ETNK1Q9HBU6 452 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 ANLNQ9NQW6 1124 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 CTNNAL1Q9UBT7 734 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 SLC24A2Q9UI40 661 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 PCDHB5Q9Y5E4 795 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 CLUHO75153 1309 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 MAGEA11P43364 429 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 CTXN3Q4LDR2 81 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 FAM171A1Q5VUB5 890 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 ZNF280DQ6N043 979 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 TMEM175Q9BSA9 504 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 ACTL7BQ9Y614 415 aa26.02■■□□□ 1.76
SHOX2-201ENST00000389589 FAM72CH0Y354 149 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 I6L893 689 aaPredicted RBP26.01■■□□□ 1.75
SHOX2-201ENST00000389589 CXCL10P02778 98 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 ERCC2P18074 760 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 TPSB2P20231 275 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 ELAVL2Q12926 359 aaKnown RBP26.01■■□□□ 1.75
SHOX2-201ENST00000389589 TPSAB1Q15661 275 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 FAM72AQ5TYM5 149 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 FAM72DQ6L9T8 149 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 ANKRD33Q7Z3H0 272 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 TADA2BQ86TJ2 420 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 FAM72BQ86X60 149 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 CRIPAKQ8N1N5 446 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 LRRN4Q8WUT4 740 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 RNF34Q969K3 372 aa26.01■■□□□ 1.75
SHOX2-201ENST00000389589 A0A0A0MRY4 1105 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 NCAM2O15394 837 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 MYCP01106 439 aaPredicted RBP26■■□□□ 1.75
SHOX2-201ENST00000389589 CHN1P15882 459 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 BRMS1LQ5PSV4 323 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 C3orf62Q6ZUJ4 267 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 SPATA13Q96N96 652 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 BEGAINQ9BUH8 593 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 OSBPL2Q9H1P3 480 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 HIPK3Q9H422 1215 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 BRCA2P51587 3418 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 MICAL3Q7RTP6 2002 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 SPAG6O75602 509 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 APRTP07741 180 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 VAV1P15498 845 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 FGFR3P22607 806 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 FDFT1P37268 417 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 EIF4EBP2Q13542 120 aaPredicted RBP26■■□□□ 1.75
SHOX2-201ENST00000389589 KLHL38Q2WGJ6 581 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 CEP57Q86XR8 500 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 NUP93Q8N1F7 819 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 MDM1Q8TC05 714 aa26■■□□□ 1.75
SHOX2-201ENST00000389589 LGMNQ99538 433 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms