RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 NPAS1Q99742 590 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 SENP7Q9BQF6 1050 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 TM2D2Q9BX73 214 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 VPS16Q9H269 839 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 CERS4Q9HA82 394 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 ERVK-5Q9HDB9 667 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 IGSF9Q9P2J2 1179 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 KLHL13Q9P2N7 655 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 SLC39A10Q9ULF5 831 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 NFU1Q9UMS0 254 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 UBE2J1Q9Y385 318 aaPredicted RBP2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZMYM2Q9UBW7 1377 aa2.68□□□□□ -1.98
RNU6-541P-201ENST00000384709 ABHD14A-ACY1A0A1B0GW23 586 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 TTC34A8MYJ7 566 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 TLX3O43711 291 aaPredicted RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 USP12O75317 370 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 PLAUP00749 431 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 ENO1P06733 434 aaKnown RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 CYP3A4P08684 503 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 FGF2P09038 288 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 ABCB4P21439 1286 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 NDUFS1P28331 727 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 HOXD9P28356 352 aaPredicted RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 HOXA7P31268 230 aaPredicted RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 PPM1AP35813 382 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 B4GALNT1Q00973 533 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 UBE4AQ14139 1066 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 MORC3Q14149 939 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 CSHL1Q14406 222 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZNF268Q14587 947 aaPredicted RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 KRT72Q14CN4 511 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 CNGA3Q16281 694 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 PFKFB3Q16875 520 aaPredicted RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 Q4G0T1 1027 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 SLC2A7Q6PXP3 512 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZNF474Q6S9Z5 364 aaPredicted RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 C16orf89Q6UX73 402 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 KYAT3Q6YP21 454 aaKnown RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 RBM44Q6ZP01 1051 aaKnown RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 MRPL10Q7Z7H8 261 aaKnown RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 TRABD2AQ86V40 505 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 P3H2Q8IVL5 708 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 MPLKIPQ8TAP9 179 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM71BQ8TC56 605 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 NPIPB3Q92617 1050 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 AKAP1Q92667 903 aaKnown RBP eCLIP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 CELF1Q92879 486 aaKnown RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 GRAMD1AQ96CP6 724 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 C18orf8Q96DM3 657 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 FCRL5Q96RD9 977 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 WDR12Q9GZL7 423 aaKnown RBP2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 PCDHGB2Q9Y5G2 931 aa2.67□□□□□ -1.98
RNU6-541P-201ENST00000384709 CYP3A7-CYP3A51PA0A087WV96 503 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 PNMA6EA0A0J9YXQ4 647 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 CCDC194A0A1B0GVG4 234 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM90A18PA6NE21 464 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM90A16PA6NEW6 464 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 C2CD4BA6NLJ0 364 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM90A9PA6NNJ1 464 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM90A5PA8MXJ8 464 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 KCNU1A8MYU2 1149 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 J3KTA2 159 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 INPPL1O15357 1258 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 KCNAB3O43448 404 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 PLIN1O60240 522 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 RNF8O76064 485 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM90A15PP0C7V4 464 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM90A14PP0C7W9 464 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 ALADP13716 330 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 TFEBP19484 476 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 DRD1P21728 446 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 CYP3A7P24462 503 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 STAT6P42226 847 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 ARHGAP25P42331 645 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 TECP42680 631 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 MMP13P45452 471 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 GSTM5P46439 218 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 ID2Q02363 134 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 GRM4Q14833 912 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 ETFDHQ16134 617 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 AAK1Q2M2I8 961 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 GLE1Q53GS7 698 aaKnown RBP2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 TANGO2Q6ICL3 276 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 FBXO38Q6PIJ6 1188 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 SYTL1Q8IYJ3 562 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 NRSN1Q8IZ57 195 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 PAQR4Q8N4S7 273 aaPredicted RBP2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 SAMD3Q8N6K7 520 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 C9orf106Q8NAJ2 232 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 OR52N4Q8NGI2 321 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 SLC22A17Q8WUG5 538 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZFPM2Q8WW38 1151 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 TRMT61AQ96FX7 289 aaKnown RBP2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 TRMOQ9BU70 441 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 ELOVL1Q9BW60 279 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 SLC29A3Q9BZD2 475 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 SPRTNQ9H040 489 aaPredicted RBP2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 RNF7Q9UBF6 113 aa2.66□□□□□ -1.98
RNU6-541P-201ENST00000384709 PI4KBQ9UBF8 816 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms