RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 CAPS2Q9BXY5 557 aa14.04□□□□□ -0.16
SEC13-203ENST00000383801 SMOC2Q9H3U7 446 aa14.04□□□□□ -0.16
SEC13-203ENST00000383801 OLA1Q9NTK5 396 aaKnown RBP14.04□□□□□ -0.16
SEC13-203ENST00000383801 MARCH5Q9NX47 278 aa14.04□□□□□ -0.16
SEC13-203ENST00000383801 CLIC5Q9NZA1 410 aa14.04□□□□□ -0.16
SEC13-203ENST00000383801 FNIP2Q9P278 1114 aa14.04□□□□□ -0.16
SEC13-203ENST00000383801 BACE2Q9Y5Z0 518 aa14.04□□□□□ -0.16
SEC13-203ENST00000383801 FNDC1Q4ZHG4 1894 aaPredicted RBP14.03□□□□□ -0.16
SEC13-203ENST00000383801 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 DCLK1O15075 740 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 IRAK2O43187 625 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 CDH16O75309 829 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 AMPD1P23109 780 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 CCR1P32246 355 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 GJA8P48165 433 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 RPL10AP62906 217 aaKnown RBP14.03□□□□□ -0.16
SEC13-203ENST00000383801 PPP2R2AP63151 447 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 SARNPP82979 210 aaKnown RBP14.03□□□□□ -0.16
SEC13-203ENST00000383801 KCTD16Q68DU8 428 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 MSANTD2Q6P1R3 559 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 KCNT2Q6UVM3 1135 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 GPR65Q8IYL9 337 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 LZTR1Q8N653 840 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 DQX1Q8TE96 717 aaKnown RBP14.03□□□□□ -0.16
SEC13-203ENST00000383801 ARMC5Q96C12 935 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 C1orf74Q96LT6 269 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 GPR62Q9BZJ7 368 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 SAYSD1Q9NPB0 183 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 ZMYND8Q9ULU4 1186 aaPredicted RBP14.03□□□□□ -0.16
SEC13-203ENST00000383801 ACTL7BQ9Y614 415 aa14.03□□□□□ -0.16
SEC13-203ENST00000383801 F8W810 466 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 OPHN1O60890 802 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 SHBGP04278 402 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 GSTA2P09210 222 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 CLTBP09497 229 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 TPSB2P20231 275 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 GYS2P54840 703 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 TPI1P60174 286 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 PITX1P78337 314 aaPredicted RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 BASP1P80723 227 aaKnown RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 GBE1Q04446 702 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 SLC10A2Q12908 348 aaPredicted RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 KCNJ11Q14654 390 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 TPSAB1Q15661 275 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 USP41Q3LFD5 358 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 TRIM60Q495X7 471 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 CTU1Q7Z7A3 348 aaKnown RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 LRRC49Q8IUZ0 686 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 VPS52Q8N1B4 723 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 PYROXD1Q8WU10 500 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 HTR3CQ8WXA8 447 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 CENPTQ96BT3 561 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 CDK5RAP1Q96SZ6 601 aaKnown RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 VAT1Q99536 393 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 TKTL2Q9H0I9 626 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 CENPHQ9H3R5 247 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 ABI2Q9NYB9 513 aaPredicted RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 OR12D3Q9UGF7 316 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 LGALS13Q9UHV8 139 aa14.02□□□□□ -0.16
SEC13-203ENST00000383801 XPO7Q9UIA9 1087 aaKnown RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 NOVA2Q9UNW9 492 aaKnown RBP14.02□□□□□ -0.16
SEC13-203ENST00000383801 MICAL3Q7RTP6 2002 aa14.02□□□□□ -0.17
SEC13-203ENST00000383801 FGF10O15520 208 aaPredicted RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 CREB3O43889 395 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 ACSL3O95573 720 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 MLNP12872 115 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 ERCC2P18074 760 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 LMAN1P49257 510 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 TUFMP49411 452 aaKnown RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 KPNA1P52294 538 aaPredicted RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 ATN1P54259 1190 aaPredicted RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 CCL23P55773 120 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 PDIA2Q13087 525 aaKnown RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 AUHQ13825 339 aaKnown RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 PRKD1Q15139 912 aaPredicted RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 SLC8B1Q6J4K2 584 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 DENND5BQ6ZUT9 1274 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 PRUNE1Q86TP1 453 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 TAC4Q86UU9 113 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 CEP57Q86XR8 500 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 SCN4BQ8IWT1 228 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 RNF168Q8IYW5 571 aaPredicted RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 PYROXD2Q8N2H3 581 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 ATP11CQ8NB49 1132 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 SCAMP5Q8TAC9 235 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 TOP1MTQ969P6 601 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 SCLYQ96I15 445 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 RHOBTB2Q9BYZ6 727 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 RETREG1Q9H6L5 497 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 EIF2B3Q9NR50 452 aaKnown RBP14.01□□□□□ -0.17
SEC13-203ENST00000383801 ETNK2Q9NVF9 386 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 BCCIPQ9P287 314 aaKnown RBP eCLIP14.01□□□□□ -0.17
SEC13-203ENST00000383801 SLC24A2Q9UI40 661 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 MAFFQ9ULX9 164 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 TLR6Q9Y2C9 796 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 VWA8A3KMH1 1905 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 PLXNA3P51805 1871 aa14.01□□□□□ -0.17
SEC13-203ENST00000383801 A0A0A0MRY4 1105 aa14□□□□□ -0.17
SEC13-203ENST00000383801 HAPLN1P10915 354 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms