RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SLC39A12Q504Y0 691 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 SLC44A4Q53GD3 710 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 SLC9A9Q8IVB4 645 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 DCP1BQ8IZD4 617 aaKnown RBP19.42■□□□□ 0.7
CSPG5-202ENST00000383738 TTC30BQ8N4P2 665 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 LRRC57Q8N9N7 239 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 ZNF317Q96PQ6 595 aaPredicted RBP19.42■□□□□ 0.7
CSPG5-202ENST00000383738 SLC27A5Q9Y2P5 690 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 WASF2Q9Y6W5 498 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 ATXN2Q99700 1313 aaKnown RBP19.42■□□□□ 0.7
CSPG5-202ENST00000383738 LTBP3Q9NS15 1303 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 DPYSL4O14531 572 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 CLPTM1O96005 669 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 SLC25A3Q00325 362 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 TLCD1Q96CP7 247 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 ARL8BQ9NVJ2 186 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 ZNF112Q9UJU3 913 aa19.42■□□□□ 0.7
CSPG5-202ENST00000383738 UBA6A0AVT1 1052 aaPredicted RBP19.41■□□□□ 0.7
CSPG5-202ENST00000383738 ARHGAP10A1A4S6 786 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 CKMP06732 381 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 PIGWQ7Z7B1 504 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 CCT7Q99832 543 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 GRIP2Q9C0E4 1043 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 MRPS6P82932 125 aaKnown RBP19.41■□□□□ 0.7
CSPG5-202ENST00000383738 CYLC2Q14093 348 aaPredicted RBP19.41■□□□□ 0.7
CSPG5-202ENST00000383738 BTG3Q14201 252 aaPredicted RBP19.41■□□□□ 0.7
CSPG5-202ENST00000383738 HABP4Q5JVS0 413 aaKnown RBP19.41■□□□□ 0.7
CSPG5-202ENST00000383738 OTOAQ7RTW8 1153 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 AMPD1P23109 780 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 MIPP30301 263 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 CCNFP41002 786 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 RIPK1Q13546 671 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 WASHC2DQ5SRD0 308 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 HDAC11Q96DB2 347 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 GORASP1Q9BQQ3 440 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 ULBP1Q9BZM6 244 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 R3HDM2Q9Y2K5 976 aaKnown RBP19.41■□□□□ 0.7
CSPG5-202ENST00000383738 AK5Q9Y6K8 562 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 RPTORQ8N122 1335 aa19.41■□□□□ 0.7
CSPG5-202ENST00000383738 ANKRD20A4Q4UJ75 823 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 IFNL1Q8IU54 200 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 RFWD2Q8NHY2 731 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 ATP6V1E2Q96A05 226 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 DNAJC1Q96KC8 554 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 MRPL45Q9BRJ2 306 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 MOSPD1Q9UJG1 213 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 AP4E1Q9UPM8 1137 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 AURKCQ9UQB9 309 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 DTNAQ9Y4J8 743 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 C10orf71Q711Q0 1435 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 STK25O00506 426 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 ARL2P36404 184 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 GARSP41250 739 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 ALDH1A3P47895 512 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SLC1A5Q15758 541 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 ASTE1Q2TB18 679 aaPredicted RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 BOLA3Q53S33 107 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 RARS2Q5T160 578 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 TMEM130Q8N3G9 435 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 C1orf127Q8N9H9 656 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 PRPF18Q99633 342 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SIKE1Q9BRV8 207 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 ATXN3LQ9H3M9 355 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 GRK4P32298 578 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 FOXN2P32314 431 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 HOXD13P35453 343 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 RPS6KA3P51812 740 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 CDKL3Q8IVW4 592 aaPredicted RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 ELMOD1Q8N336 334 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SERPINI1Q99574 410 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 CNPY3Q9BT09 278 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 GALNT8Q9NY28 637 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 PADI3Q9ULW8 664 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SRRM3A6NNA2 597 aaPredicted RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SH3BP5O60239 455 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 DARSP14868 501 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SERPINB5P36952 375 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 FASTKD3Q14CZ7 662 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SH3D19Q5HYK7 790 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 RNF219Q5W0B1 726 aaPredicted RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 CWF19L1Q69YN2 538 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 DENND5BQ6ZUT9 1274 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 ALYREFQ86V81 257 aaKnown RBP19.4■□□□□ 0.7
CSPG5-202ENST00000383738 COLEC11Q9BWP8 271 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 DCLK3Q9C098 648 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 RNF39Q9H2S5 420 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 FAM105AQ9NUU6 356 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SLC12A4Q9UP95 1085 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 CHKBQ9Y259 395 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 IPPQ9Y573 584 aa19.4■□□□□ 0.7
CSPG5-202ENST00000383738 SLC12A8A0AV02 714 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 E9PBE3 544 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 H0YGN5 161 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 KLHL41O60662 606 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 ASS1P00966 412 aaKnown RBP19.39■□□□□ 0.69
CSPG5-202ENST00000383738 ARHGAP1Q07960 439 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 NFS1Q9Y697 457 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 SLX4Q8IY92 1834 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 ACADSBP45954 432 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 EFTUD2Q15029 972 aaKnown RBP eCLIP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms