RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 PDAP1Q13442 181 aaKnown RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 ARMCX6Q7L4S7 300 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 EXOC8Q8IYI6 725 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 FAM47BQ8NA70 645 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 FBXL8Q96CD0 374 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 PRMT6Q96LA8 375 aaPredicted RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 ING2Q9H160 280 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 TASP1Q9H6P5 420 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 CYP26B1Q9NR63 512 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 FAM49BQ9NUQ9 324 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 NYAP2Q9P242 653 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MYRFQ9Y2G1 1151 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 THRAP10827 490 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 TBXAS1P24557 533 aaPredicted RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 ADSSP30520 456 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MYL6P60660 151 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 CCNIQ14094 377 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 HABP4Q5JVS0 413 aaKnown RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 HEATR6Q6AI08 1181 aaKnown RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 FBXL19Q6PCT2 694 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 MON1BQ7L1V2 547 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 TDRD5Q8NAT2 981 aaKnown RBP12.51□□□□□ -0.41
SHOX-203ENST00000381578 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 EP400Q96L91 3159 aa12.51□□□□□ -0.41
SHOX-203ENST00000381578 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 SLC26A4O43511 780 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 ZC3H11AO75152 810 aaKnown RBP eCLIP12.5□□□□□ -0.41
SHOX-203ENST00000381578 TNNC2P02585 160 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CSH1P0DML2 217 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CSH2P0DML3 217 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CDK4P11802 303 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 PCSK6P29122 969 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 MIPP30301 263 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CDH8P55286 799 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 APOL2Q9BQE5 337 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 INO80BQ9C086 356 aaPredicted RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 ASNSD1Q9NWL6 643 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 FBXO40Q9UH90 709 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 DRG1Q9Y295 367 aaKnown RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 DOCK2Q92608 1830 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 NFIBO00712 420 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 SPAG6O75602 509 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 SERPINE1P05121 402 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 XRCC1P18887 633 aaPredicted RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 KDELR1P24390 212 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CDKN2BP42772 138 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 SLC12A2P55011 1212 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 NUP107P57740 925 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 GRM1Q13255 1194 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 UGCGQ16739 394 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 MTX3Q5HYI7 312 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 TDRD10Q5VZ19 366 aaKnown RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 ZBTB8BQ8NAP8 495 aaPredicted RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 IL31RAQ8NI17 732 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 PDCD6IPQ8WUM4 868 aaKnown RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 SLC7A3Q8WY07 619 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 ATP6V0A1Q93050 837 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 USP29Q9HBJ7 922 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 TJP2Q9UDY2 1190 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 USP18Q9UMW8 372 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CDY2AQ9Y6F7 541 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CDY1Q9Y6F8 540 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 SNED1Q8TER0 1413 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 APOL1O14791 398 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 USP12O75317 370 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 PENKP01210 267 aaPredicted RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 S100BP04271 92 aaPredicted RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 ALOX15P16050 662 aaPredicted RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 C15orf59Q2T9L4 293 aaPredicted RBP12.5□□□□□ -0.41
SHOX-203ENST00000381578 KIF19Q2TAC6 998 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 C1orf220Q5T0J3 134 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 EEPD1Q7L9B9 569 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CHSY1Q86X52 802 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 NUP93Q8N1F7 819 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 PAF1Q8N7H5 531 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CNDP1Q96KN2 507 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 NPAS2Q99743 824 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CCDC28BQ9BUN5 200 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 CISHQ9NSE2 258 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 ZNF229Q9UJW7 825 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 SLC39A10Q9ULF5 831 aa12.5□□□□□ -0.41
SHOX-203ENST00000381578 KPNA7A9QM74 516 aa12.49□□□□□ -0.41
SHOX-203ENST00000381578 ERVK-10P10266 1014 aa12.49□□□□□ -0.41
SHOX-203ENST00000381578 ME2P23368 584 aa12.49□□□□□ -0.41
SHOX-203ENST00000381578 RPL10P27635 214 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms