RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 DDI1Q8WTU0 396 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 BHMTQ93088 406 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 MRGPRX1Q96LB2 322 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 ACOX2Q99424 681 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 SLC32A1Q9H598 525 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 CACNA2D2Q9NY47 1150 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 STOML2Q9UJZ1 356 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 PCDHB4Q9Y5E5 795 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 STON1Q9Y6Q2 735 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 CHD8Q9HCK8 2581 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 CDX4O14627 284 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 SERPINF2P08697 491 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 ITPKAP23677 461 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 OXTRP30559 389 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 ANP32AP39687 249 aaKnown RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 MARSP56192 900 aaKnown RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 DAOAP59103 153 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 GFPT1Q06210 699 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 LRMPQ12912 555 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 WDR45BQ5MNZ6 344 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 MPP7Q5T2T1 576 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 ADGRF1Q5T601 910 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 NUGGCQ68CJ6 796 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 KLHL10Q6JEL2 608 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 PSAPL1Q6NUJ1 521 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 ARMCX6Q7L4S7 300 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 UNC45BQ8IWX7 931 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 SLC35F5Q8WV83 523 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 NELFBQ8WX92 580 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 ZNF419Q96HQ0 510 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 PIWIL1Q96J94 861 aaKnown RBP13.56□□□□□ -0.24
RPAIN-202ENST00000381208 FAM81BQ96LP2 452 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 TRIM62Q9BVG3 475 aa13.56□□□□□ -0.24
RPAIN-202ENST00000381208 PI4KAP42356 2102 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 YJEFN3A6XGL0 299 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 UPK3BL1B0FP48 263 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 PATE3B3GLJ2 98 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 UPK3BL2E5RIL1 263 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 E7ENQ6 273 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 IRAK2O43187 625 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 SYPP08247 313 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 GNSP15586 552 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 ENGP17813 658 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 CD6P30203 668 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 RING1Q06587 406 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 PAK1Q13153 545 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 MEA1Q16626 185 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 GEN1Q17RS7 908 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 SH3PXD2AQ5TCZ1 1133 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 KIAA1211LQ6NV74 962 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 MSANTD2Q6P1R3 559 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 KIAA1324Q6UXG2 1013 aaKnown RBP13.55□□□□□ -0.24
RPAIN-202ENST00000381208 BHLHA9Q7RTU4 235 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 HDDC3Q8N4P3 179 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 FRMD1Q8N878 549 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 UBA3Q8TBC4 463 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 AZIN2Q96A70 460 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 TMA16Q96EY4 203 aaKnown RBP13.55□□□□□ -0.24
RPAIN-202ENST00000381208 DDX50Q9BQ39 737 aaKnown RBP13.55□□□□□ -0.24
RPAIN-202ENST00000381208 FBRSQ9HAH7 460 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 PRDM16Q9HAZ2 1276 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 TMEM74BQ9NUR3 256 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 CYP8B1Q9UNU6 501 aa13.55□□□□□ -0.24
RPAIN-202ENST00000381208 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.55□□□□□ -0.24
RPAIN-202ENST00000381208 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 M0QYV0 167 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 TULP2O00295 520 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 CFIP05156 583 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 LCP1P13796 627 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 IL12RB1P42701 662 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 ACADSBP45954 432 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 SLC11A2P49281 568 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 KCNH2Q12809 1159 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 NNTQ13423 1086 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 HNRNPDQ14103 355 aaKnown RBP13.54□□□□□ -0.24
RPAIN-202ENST00000381208 MORC3Q14149 939 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 FUT11Q495W5 492 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 ENOSF1Q7L5Y1 443 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 RBBP8NLQ8NC74 664 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-202ENST00000381208 EHBP1Q8NDI1 1231 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 CADM4Q8NFZ8 388 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 LMO3Q8TAP4 145 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 PRCCQ92733 491 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-202ENST00000381208 SIPA1Q96FS4 1042 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 ZDHHC5Q9C0B5 715 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 CIPCQ9C0C6 399 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 CAPN10Q9HC96 672 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 PLA2G4CQ9UP65 541 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.54□□□□□ -0.24
RPAIN-202ENST00000381208 RAD54BQ9Y620 910 aa13.54□□□□□ -0.24
RPAIN-202ENST00000381208 TYW5A2RUC4 315 aaKnown RBP13.53□□□□□ -0.24
RPAIN-202ENST00000381208 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms