RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 PROK1P58294 105 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 RPS7P62081 194 aaKnown RBP4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 CSHL1Q14406 222 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 SMAD1Q15797 465 aaKnown RBP4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 GALNTL6Q49A17 601 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 CERCAMQ5T4B2 595 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 SLC9C2Q5TAH2 1124 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 SFRP4Q6FHJ7 346 aaPredicted RBP4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 Q8NA96 180 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 ST8SIA4Q92187 359 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 PGBD1Q96JS3 809 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 WDR24Q96S15 920 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 BARD1Q99728 777 aaKnown RBP4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 REEP2Q9BRK0 252 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 AGXT2Q9BYV1 514 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 PAIP1Q9H074 479 aaKnown RBP4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 ZCWPW1Q9H0M4 648 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 OLA1Q9NTK5 396 aaKnown RBP4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 NDUFAF4Q9P032 175 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 AASSQ9UDR5 926 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 SLC45A1Q9Y2W3 748 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 AFG3L2Q9Y4W6 797 aa4.8□□□□□ -1.64
SNAPC3-201ENST00000380799 SPATA31A3Q5VYP0 1347 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CGB1A6NKQ9 187 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 KIF28PB7ZC32 967 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 F5H697 171 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 ZFPL1O95159 310 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CNPP09543 421 aaKnown RBP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 HNRNPA1P09651 372 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 NPTX2P47972 431 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 RBM5P52756 815 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CASP6P55212 293 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 FPGSQ05932 587 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 DYRK1AQ13627 763 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 PTPRRQ15256 657 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 ANKRD1Q15327 319 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CD300EQ496F6 205 aaPredicted RBP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 PREPLQ4J6C6 727 aaPredicted RBP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 SLC45A4Q5BKX6 768 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 RBM20Q5T481 1227 aaKnown RBP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CLEC9AQ6UXN8 241 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 SUN3Q8TAQ9 357 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 HMGB4Q8WW32 186 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 RFFLQ8WZ73 363 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CENPIQ92674 756 aaPredicted RBP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 ZUFSPQ96AP4 578 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 MCRS1Q96EZ8 462 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CHCHD6Q9BRQ6 235 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 PLEKHA5Q9HAU0 1116 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 CLIC5Q9NZA1 410 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 PI4KBQ9UBF8 816 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 ZNF70Q9UC06 446 aaPredicted RBP4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 SERTAD3Q9UJW9 196 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 SSX2IPQ9Y2D8 614 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 DNAJC16Q9Y2G8 782 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 SLC27A6Q9Y2P4 619 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 WNT6Q9Y6F9 365 aa4.79□□□□□ -1.64
SNAPC3-201ENST00000380799 A0A087X0M5 115 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 A0A1B0GX30 115 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 FAM90A20PA6NIJ5 464 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 STX16-NPEPL1H3BU86 382 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 STX16O14662 325 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 FIBPO43427 364 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 TFRCP02786 760 aaKnown RBP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 PRKCGP05129 697 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 RBL1P28749 1068 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 EPHA3P29320 983 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 CD6P30203 668 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 HTR7P34969 479 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 CDK7P50613 346 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 PDE6CP51160 858 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 TIAL1Q01085 375 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 SF3A3Q12874 501 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 PRKG2Q13237 762 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 PDCLQ13371 301 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 HLXQ14774 488 aaPredicted RBP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 EZH2Q15910 746 aaKnown RBP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 P3H1Q32P28 736 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 TSTD2Q5T7W7 516 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 DEPDC1Q5TB30 811 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 ICE2Q659A1 982 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 ACAD10Q6JQN1 1059 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 MSANTD2Q6P1R3 559 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 PEG10Q86TG7 708 aaKnown RBP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 TRABD2AQ86V40 505 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 ADGRG5Q8IZF4 528 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 ABRAQ8N0Z2 381 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 FSTL5Q8N475 847 aaPredicted RBP4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 C11orf44Q8N8P7 122 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 ATRIPQ8WXE1 791 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 TMEM125Q96AQ2 219 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 HAPLN3Q96S86 360 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 MECRQ9BV79 373 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 ABHD16BQ9H3Z7 469 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 NFU1Q9UMS0 254 aa4.78□□□□□ -1.64
SNAPC3-201ENST00000380799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms