RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 METTL18O95568 372 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 SKIP12755 728 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 CTGFP29279 349 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 NDUFV1P49821 464 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 SCNN1GP51170 649 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 NME3Q13232 169 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 UPP1Q16831 310 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 TTC39BQ5VTQ0 682 aaPredicted RBP13.03□□□□□ -0.32
VPS16-202ENST00000380445 RNF43Q68DV7 783 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 LVRNQ6Q4G3 990 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 NDRG1Q92597 394 aaKnown RBP13.03□□□□□ -0.32
VPS16-202ENST00000380445 LPPQ93052 612 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 SPATA13Q96N96 652 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 ULBP1Q9BZM6 244 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 HAUS2Q9NVX0 235 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 MIOSQ9NXC5 875 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PRKAG3Q9UGI9 489 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 F9P00740 461 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 MLNP12872 115 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PRKCHP24723 683 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 THPOP40225 353 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 MAGEA3P43357 314 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 GLUD2P49448 558 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 ZNF135P52742 658 aaPredicted RBP13.03□□□□□ -0.32
VPS16-202ENST00000380445 SLC1A5Q15758 541 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 RAB41Q5JT25 222 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 BANPQ8N9N5 519 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PGAP3Q96FM1 320 aaPredicted RBP13.03□□□□□ -0.32
VPS16-202ENST00000380445 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 XPNPEP3Q9NQH7 507 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 DSEQ9UL01 958 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PADI3Q9ULW8 664 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 SLC12A4Q9UP95 1085 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 SYNJ2BP-COX16A0A087WUM0 186 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 MYBPHLA2RUH7 354 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 EEF2KO00418 725 aaKnown RBP13.02□□□□□ -0.32
VPS16-202ENST00000380445 CREB3O43889 395 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 RASSF9O75901 435 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 APOEP02649 317 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 PAFAH1B3Q15102 231 aaKnown RBP13.02□□□□□ -0.32
VPS16-202ENST00000380445 OTUD1Q5VV17 481 aaPredicted RBP13.02□□□□□ -0.32
VPS16-202ENST00000380445 SYPL2Q5VXT5 272 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 CTAGE3PQ8IX95 158 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 SMOQ99835 787 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 EBNA1BP2Q99848 306 aaKnown RBP13.02□□□□□ -0.32
VPS16-202ENST00000380445 VPS11Q9H270 941 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 GPBP1L1Q9HC44 474 aaPredicted RBP13.02□□□□□ -0.32
VPS16-202ENST00000380445 COX16Q9P0S2 106 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 PHTF1Q9UMS5 762 aa13.02□□□□□ -0.32
VPS16-202ENST00000380445 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 FAM155AB1AL88 458 aaPredicted RBP13.02□□□□□ -0.33
VPS16-202ENST00000380445 LPXNO60711 386 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 LTFP02788 710 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 ASGR1P07306 291 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 IBSPP21815 317 aaPredicted RBP13.02□□□□□ -0.33
VPS16-202ENST00000380445 ADRA1BP35368 520 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 HCAR3P49019 387 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 FLT3LGP49771 235 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 SCAPQ12770 1279 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 DNAJC3Q13217 504 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 WLSQ5T9L3 541 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 RFX8Q6ZV50 586 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 CYS1Q717R9 158 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 CCNJLQ8IV13 435 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 ACBD6Q9BR61 282 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 TRIM62Q9BVG3 475 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.33
VPS16-202ENST00000380445 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 SLC40A1Q9NP59 571 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 EIF2B3Q9NR50 452 aaKnown RBP13.02□□□□□ -0.33
VPS16-202ENST00000380445 PIGVQ9NUD9 493 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 TTLL3Q9Y4R7 772 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 TIMM13Q9Y5L4 95 aaPredicted RBP13.02□□□□□ -0.33
VPS16-202ENST00000380445 TLL2Q9Y6L7 1015 aa13.02□□□□□ -0.33
VPS16-202ENST00000380445 A0A0U1RQF3 1178 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 NCAM2O15394 837 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 MFSD11O43934 449 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 ADAMTS4O75173 837 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 SNRPAP09012 282 aaKnown RBP13.01□□□□□ -0.33
VPS16-202ENST00000380445 NCAM1P13591 858 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 SLC18A2Q05940 514 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 AP1B1Q10567 949 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 PRKD1Q15139 912 aaPredicted RBP13.01□□□□□ -0.33
VPS16-202ENST00000380445 TIGD5Q53EQ6 642 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 FAM47EQ6ZV65 393 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 PPM1NQ8N819 430 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 COLGALT1Q8NBJ5 622 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 C3orf58Q8NDZ4 430 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 IRGQQ8WZA9 623 aa13.01□□□□□ -0.33
VPS16-202ENST00000380445 MTBPQ96DY7 904 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms