RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SPATA13Q96N96 652 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 ADAM2Q99965 735 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 BRD8Q9H0E9 1235 aa23.89■■□□□ 1.41
VPS16-201ENST00000380443 EIF2B3Q9NR50 452 aaKnown RBP23.89■■□□□ 1.41
VPS16-201ENST00000380443 HHLA1C9JL84 531 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 NCAM2O15394 837 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 SNX3O60493 162 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 OPHN1O60890 802 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 APRTP07741 180 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 NRLP54845 237 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 SYPL2Q5VXT5 272 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 PM20D1Q6GTS8 502 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 C10orf67Q8IYJ2 551 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 DCAKDQ8WVC6 231 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 SLC44A1Q8WWI5 657 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 NDRG1Q92597 394 aaKnown RBP23.88■■□□□ 1.41
VPS16-201ENST00000380443 ABHD8Q96I13 439 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 FBXW11Q9UKB1 542 aa23.88■■□□□ 1.41
VPS16-201ENST00000380443 KBTBD13C9JR72 458 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 NRP1O14786 923 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 TYROBPO43914 113 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 FAM155BO75949 473 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 B3GAT3O94766 335 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 CPP00450 1065 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 FYNP06241 537 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 TSC2P49815 1807 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 YWHAGP61981 247 aaKnown RBP eCLIP23.87■■□□□ 1.41
VPS16-201ENST00000380443 DPYSQ14117 519 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 PRKD1Q15139 912 aaPredicted RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 CAND1Q86VP6 1230 aaKnown RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 TGS1Q96RS0 853 aaKnown RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 ELAC2Q9BQ52 826 aaKnown RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 TIMM13Q9Y5L4 95 aaPredicted RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 TCRBV9S1A1TA0A576 114 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 EEF2KO00418 725 aaKnown RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 EOMESO95936 686 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 IGFBP6P24592 240 aaPredicted RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 LGSNQ5TDP6 509 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 FAM43BQ6ZT52 329 aaPredicted RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 RFX8Q6ZV50 586 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 CYS1Q717R9 158 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 ZNF598Q86UK7 904 aaKnown RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 ECHDC2Q86YB7 292 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 IGDCC3Q8IVU1 814 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 PYROXD2Q8N2H3 581 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 SLC7A14Q8TBB6 771 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 MYLPFQ96A32 169 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 SUSD3Q96L08 255 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 DMAP1Q9NPF5 467 aaPredicted RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 PIGVQ9NUD9 493 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 ZC3H7BQ9UGR2 993 aaKnown RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 ZNF180Q9UJW8 692 aa23.87■■□□□ 1.41
VPS16-201ENST00000380443 USP15Q9Y4E8 981 aaPredicted RBP23.87■■□□□ 1.41
VPS16-201ENST00000380443 CCT8L1PA6NM43 557 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 YJEFN3A6XGL0 299 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 FOXO6A8MYZ6 492 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 E7ENQ6 273 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 TM9SF1O15321 606 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 SUN1O94901 812 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 OAS1P00973 400 aaKnown RBP23.86■■□□□ 1.41
VPS16-201ENST00000380443 INHBAP08476 426 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 NME3Q13232 169 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 ANKRD20A2Q5SQ80 823 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 MAP3K21Q5TCX8 1036 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 ANKRD20A1Q5TYW2 823 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 ANKRD20A3Q5VUR7 823 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 NUGGCQ68CJ6 796 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 MZB1Q8WU39 189 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 ARMC5Q96C12 935 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 RTP3Q9BQQ7 232 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 TSEN34Q9BSV6 310 aaKnown RBP23.86■■□□□ 1.41
VPS16-201ENST00000380443 WDR6Q9NNW5 1121 aaKnown RBP23.86■■□□□ 1.41
VPS16-201ENST00000380443 CACNG4Q9UBN1 327 aa23.86■■□□□ 1.41
VPS16-201ENST00000380443 MOXD2PA6NHM9 499 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 TRIM66O15016 1216 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 CA4P22748 312 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 PRKCHP24723 683 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 WDR4P57081 412 aaKnown RBP23.85■■□□□ 1.41
VPS16-201ENST00000380443 SEMA3BQ13214 749 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 HFE2Q6ZVN8 426 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 CCNJLQ8IV13 435 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 GDAP1Q8TB36 358 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 SH3TC2Q8TF17 1288 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 RSPH1Q8WYR4 309 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 CCT6BQ92526 530 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 KCNK16Q96T55 309 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 PKMYT1Q99640 499 aa23.85■■□□□ 1.41
VPS16-201ENST00000380443 DCLK1O15075 740 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 METTL18O95568 372 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 POMCP01189 267 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 USP17L7P0C7H9 530 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 NCAM1P13591 858 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 ELNP15502 786 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 CYP2C18P33260 490 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 ACLYP53396 1101 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 TSPY1Q01534 308 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 CD300LGQ6UXG3 332 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 SLC26A11Q86WA9 606 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 RNF169Q8NCN4 708 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 MAGEB5Q9BZ81 275 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms