RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 OR2T3Q8NH03 318 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 CDK5RAP1Q96SZ6 601 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 ARID3AQ99856 593 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 DUSP16Q9BY84 665 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 PNPLA8Q9NP80 782 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 DMAC2Q9NW81 257 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 KIAA1522Q9P206 1035 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 STRIP2Q9ULQ0 834 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 FRMD4BQ9Y2L6 1034 aa18.63■□□□□ 0.57
PDLIM4-202ENST00000379018 FSBPO95073 299 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 ME1P48163 572 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 ZNF132P52740 706 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 TEAD4Q15561 434 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 ADAT2Q7Z6V5 191 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 TMC2Q8TDI7 906 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 TAS1R2Q8TE23 839 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 HEXIM2Q96MH2 286 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 NIF3L1Q9GZT8 377 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 CLIC5Q9NZA1 410 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 SERTAD1Q9UHV2 236 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 ANKRD6Q9Y2G4 727 aa18.62■□□□□ 0.57
PDLIM4-202ENST00000379018 KLRC4O43908 158 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 VAMP7P51809 220 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 EIF4HQ15056 248 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 KMT5BQ4FZB7 885 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 C1orf220Q5T0J3 134 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 DHRS13Q6UX07 377 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 GALNT15Q8N3T1 639 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 C1orf216Q8TAB5 229 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 NDRG1Q92597 394 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 INTS4Q96HW7 963 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 BACH2Q9BYV9 841 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 KCTD10Q9H3F6 313 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 CYP3A43Q9HB55 503 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 TM9SF3Q9HD45 589 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 PCDHGB2Q9Y5G2 931 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 USP3Q9Y6I4 520 aa18.61■□□□□ 0.57
PDLIM4-202ENST00000379018 BPTFQ12830 3046 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 SEMA4FO95754 770 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 IGLV3-19P01714 112 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 CCT8P50990 548 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 YWHAGP61981 247 aaKnown RBP eCLIP18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 E2F5Q15329 346 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 CHST9Q7L1S5 443 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 SLC9A9Q8IVB4 645 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 CCDC150Q8NCX0 1101 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 DNAI2Q9GZS0 605 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 SCUBE2Q9NQ36 999 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 PCDHA7Q9UN72 937 aa18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-202ENST00000379018 GCN1Q92616 2671 aaKnown RBP18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 TP53BP1Q12888 1972 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 FAM47DPA6NHR8 397 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 H0Y8X5 98 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 TNFSF14O43557 240 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 CALUO43852 315 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 PDIA4P13667 645 aaKnown RBP18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 CLDN6P56747 220 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 KCNT1Q5JUK3 1230 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 PIGZQ86VD9 579 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 FMNL3Q8IVF7 1028 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 ARHGAP18Q8N392 663 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 CPXM2Q8N436 756 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 RBBP8NLQ8NC74 664 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 PIP4K2CQ8TBX8 421 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 GANCQ8TET4 914 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 BIRC7Q96CA5 298 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 BTBD1Q9H0C5 482 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 ABCB8Q9NUT2 735 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 PLA2G4CQ9UP65 541 aa18.59■□□□□ 0.57
PDLIM4-202ENST00000379018 PDXKO00764 312 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 IKBKBO14920 756 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 DNTTP04053 509 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 KRT13P13646 458 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 HOXD9P28356 352 aaPredicted RBP18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 HLA-FP30511 346 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 GRK6P43250 576 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 TKTL1P51854 596 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 PPP3CAQ08209 521 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 CAMK2GQ13555 558 aaPredicted RBP18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 MPPE1Q53F39 396 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 RESP18Q5W5W9 173 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 ENGASEQ8NFI3 743 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 PLD4Q96BZ4 506 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 PAGE5Q96GU1 130 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 SLC2A11Q9BYW1 496 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 FTSJ1Q9UET6 329 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 SFMBT1Q9UHJ3 866 aa18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 SMG1Q96Q15 3661 aaKnown RBP18.58■□□□□ 0.56
PDLIM4-202ENST00000379018 PLK4O00444 970 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 TIMM44O43615 452 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 DKK1O94907 266 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 PRB1P04280 392 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 NR2F2P24468 414 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 GRIA4P48058 902 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 HARS2P49590 506 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 C21orf59P57076 290 aa18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 RPS14P62263 151 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 TTC31Q49AM3 519 aaPredicted RBP18.57■□□□□ 0.56
PDLIM4-202ENST00000379018 PRAMEF14Q5SWL7 426 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms