RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 RAB3IL1Q8TBN0 382 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 ADAMTS16Q8TE57 1224 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 DCAKDQ8WVC6 231 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 HSPBAP1Q96EW2 488 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 FIZ1Q96SL8 496 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 TBCBQ99426 244 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 NEURL2Q9BR09 285 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 PLGRKTQ9HBL7 147 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 LRP2BPQ9P2M1 347 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 XPO7Q9UIA9 1087 aaKnown RBP6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 GTF3C4Q9UKN8 822 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 PCDHB10Q9UN67 800 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 IRS2Q9Y4H2 1338 aa6.91□□□□□ -1.3
CDKAL1-202ENST00000378610 EXOC1LA0A1B0GW35 172 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 DNALI1O14645 258 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 GRIN3BO60391 1043 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 SNNO75324 88 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CLPTM1O96005 669 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 FTLP02792 175 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PEX2P28328 305 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PRDX6P30041 224 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 WNT7BP56706 349 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 ZNF423Q2M1K9 1284 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 SGO2Q562F6 1265 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 TMEM240Q5SV17 173 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 IER5LQ5T953 404 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 TTBK2Q6IQ55 1244 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PTCRAQ6ISU1 281 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CCDC62Q6P9F0 684 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 LRRC8BQ6P9F7 803 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 KIF6Q6ZMV9 814 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CMTR2Q8IYT2 770 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 ACTRT2Q8TDY3 377 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 SLC20A1Q8WUM9 679 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 HDAC2Q92769 488 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 FOXJ1Q92949 421 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 RBM15Q96T37 977 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 DOK1Q99704 481 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 TSSK1BQ9BXA7 367 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 INTS2Q9H0H0 1204 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CHRDQ9H2X0 955 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PFDN4Q9NQP4 134 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 LATS2Q9NRM7 1088 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 NFKBIL1Q9UBC1 381 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CLUHO75153 1309 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 FAM221AA4D161 298 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 E5RJQ4 531 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 E9PMD0 336 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 H0YJX3 145 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CLDN3O15551 220 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 TNFAIP8O95379 198 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 JMJD7P0C870 316 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 SNHG28P0DPA3 235 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PTPN2P17706 415 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CA4P22748 312 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 POLR2BP30876 1174 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 NAPAP54920 295 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 NR1H2P55055 460 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 VCPP55072 806 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 HTRA3P83110 453 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 EFHC1Q5JVL4 640 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 RABGAP1LQ5R372 815 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 CES4AQ5XG92 561 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 RWDD4Q6NW29 188 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PATL1Q86TB9 770 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 SAMD14Q8IZD0 417 aaPredicted RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 GDPD5Q8WTR4 605 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 ZDHHC1Q8WTX9 485 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 FAM81BQ96LP2 452 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 TMEM47Q9BQJ4 181 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 SIKE1Q9BRV8 207 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 WDR83Q9BRX9 315 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PLEKHA5Q9HAU0 1116 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 GGA3Q9NZ52 723 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PCDHGB4Q9UN71 923 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 NIP7Q9Y221 180 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 R3HDM2Q9Y2K5 976 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 HBS1LQ9Y450 684 aaKnown RBP6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 PCDHGB5Q9Y5G0 923 aa6.9□□□□□ -1.3
CDKAL1-202ENST00000378610 LOC102724428A0A0B4J2F2 783 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 A0A1W2PRG0 241 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 SDR42E2A6NKP2 422 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 FOXN3O00409 490 aaPredicted RBP6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 FBP2O00757 339 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 P4HA2O15460 535 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 ITM2AO43736 263 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 TOM1O60784 492 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 C1QAP02745 245 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 SERPINA6P08185 405 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 CYP2D6P10635 497 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 ZNF23P17027 643 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 KRT4P19013 534 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 HSD17B7P56937 341 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 SIK1P57059 783 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 AGERQ15109 404 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 EPC2Q52LR7 807 aa6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 HERC4Q5GLZ8 1057 aaPredicted RBP6.9□□□□□ -1.31
CDKAL1-202ENST00000378610 RNASEH2BQ5TBB1 312 aaKnown RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms