RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PDPK2PQ6A1A2 396 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 TRPM8Q7Z2W7 1104 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 VPS45Q9NRW7 570 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 HS6ST1O60243 411 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 RBMXL2O75526 392 aaKnown RBP16.72■□□□□ 0.27
RGP1-201ENST00000378078 ATG7O95352 703 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 PDHA2P29803 388 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
RGP1-201ENST00000378078 DSG1Q02413 1049 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 PTSQ03393 145 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 ARMCX4Q5H9R4 360 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 EXOC2Q96KP1 924 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 PHF20Q9BVI0 1012 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 PACSIN1Q9BY11 444 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 MROH8Q9H579 483 aa16.72■□□□□ 0.27
RGP1-201ENST00000378078 ZNF24P17028 368 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 CYP4F2P78329 520 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 CYP4F3Q08477 520 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 CCSAPQ6IQ19 270 aaPredicted RBP16.71■□□□□ 0.27
RGP1-201ENST00000378078 PLEKHA7Q6IQ23 1121 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 CCT8L2Q96SF2 557 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 TIPINQ9BVW5 301 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 COG5Q9UP83 839 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 SH3GLB1Q9Y371 365 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 PCDHB2Q9Y5E7 798 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 TRBV23OR9-2A0A075B6M9 112 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 FAM220BPB1ANY3 271 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 OR10H2O60403 315 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 MAPK1P28482 360 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 TBX4P57082 545 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 STXBP1P61764 594 aaKnown RBP16.71■□□□□ 0.27
RGP1-201ENST00000378078 DDR2Q16832 855 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 TP53INP1Q96A56 240 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 SEMA6AQ9H2E6 1030 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 RBM22Q9NW64 420 aaKnown RBP eCLIP16.71■□□□□ 0.27
RGP1-201ENST00000378078 ZNF862O60290 1169 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 ZNF37AP17032 561 aaPredicted RBP16.71■□□□□ 0.27
RGP1-201ENST00000378078 BDNFP23560 247 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 MAGEA10P43363 369 aaPredicted RBP16.71■□□□□ 0.27
RGP1-201ENST00000378078 SPIDRQ14159 915 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 SPOCD1Q6ZMY3 1216 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 AGMOQ6ZNB7 445 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 ABCG4Q9H172 646 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 ARMC7Q9H6L4 198 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 FAM25EA8MYX2 175 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 FDX1P10109 184 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 FDFT1P37268 417 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 RNF19BQ6ZMZ0 732 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 HPS6Q86YV9 775 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 PPP1R2P1Q96PQ5 205 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 FERD3LQ96RJ6 166 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 C10orf88Q9H8K7 445 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 ATP13A1Q9HD20 1204 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 DIABLOQ9NR28 239 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 MSRAQ9UJ68 235 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 PHTF1Q9UMS5 762 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 PPP2R1BP30154 601 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 CTNNB1P35222 781 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 ZNF280DQ6N043 979 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 CXorf40AQ8TE69 158 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 PRMT6Q96LA8 375 aaPredicted RBP16.71■□□□□ 0.27
RGP1-201ENST00000378078 VANGL2Q9ULK5 521 aa16.71■□□□□ 0.27
RGP1-201ENST00000378078 PFKPQ01813 784 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 CAMK1Q14012 370 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 PKN1Q16512 942 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 MPZL3Q6UWV2 235 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 MFSD7Q6UXD7 560 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 CASP12Q6UXS9 341 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 RNF148Q8N7C7 305 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 ZIM3Q96PE6 472 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 KIF2CQ99661 725 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 COQ7Q99807 217 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 ANO9A1A5B4 782 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 CALCAP01258 141 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 MYL6P60660 151 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 STON1Q9Y6Q2 735 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 ORC2Q13416 577 aaPredicted RBP16.7■□□□□ 0.26
RGP1-201ENST00000378078 NAB2Q15742 525 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 ZC3H7AQ8IWR0 971 aaKnown RBP16.7■□□□□ 0.26
RGP1-201ENST00000378078 SCUBE3Q8IX30 993 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 NMD3Q96D46 503 aaKnown RBP16.7■□□□□ 0.26
RGP1-201ENST00000378078 ANGPT4Q9Y264 503 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 PTGES3LE9PB15 166 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 TALDO1P37837 337 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 LAMTOR4Q0VGL1 99 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 DCDC2Q9UHG0 476 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 CCDC154A6NI56 674 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 CRATP43155 626 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 DMPKQ09013 629 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 ATP1A4Q13733 1029 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 GRIK4Q16099 956 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 MILR1Q7Z6M3 343 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 SPATA20Q8TB22 786 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 DPY30Q9C005 99 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 SEPT3Q9UH03 358 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 TMEM191CA6NGB0 347 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 SCGNO76038 276 aa16.7■□□□□ 0.26
RGP1-201ENST00000378078 MICAL2O94851 1124 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms