RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 XPO1O14980 1071 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 GALTP07902 379 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 RENBPP51606 427 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 ITGA8P53708 1063 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 GNGT1P63211 74 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 TXNDC8Q6A555 127 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 AADACL2Q6P093 401 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 SLC39A4Q6P5W5 647 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 TBC1D1Q86TI0 1168 aaPredicted RBP8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 NOA1Q8NC60 698 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 SNRNP25Q9BV90 132 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 WBP1LQ9NX94 342 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 ARHGEF38Q9NXL2 777 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 FBXO10Q9UK96 956 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 NCOR1O75376 2440 aa8.72□□□□□ -1.01
CRNKL1-202ENST00000377340 THSD7AQ9UPZ6 1657 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 C2orf81A6NN90 581 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 GFAPP14136 432 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 COILP38432 576 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 MAXP61244 160 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 KDSRQ06136 332 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 USP10Q14694 798 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 ZNF284Q2VY69 593 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 GLE1Q53GS7 698 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 TIGD7Q6NT04 549 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 GRASPQ7Z6J2 395 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 SLC4A11Q8NBS3 891 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 EXD1Q8NHP7 514 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 ZMAT2Q96NC0 199 aaKnown RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 TRAIPQ9BWF2 469 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 UBA2Q9UBT2 640 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 COL2A1P02458 1487 aaPredicted RBP8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 BRWD3Q6RI45 1802 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 CITO14578 2027 aa8.71□□□□□ -1.01
CRNKL1-202ENST00000377340 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 CYP3A5P20815 502 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 CORO1AP31146 461 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 MATKP42679 507 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 IL9RQ01113 521 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 CAV1Q03135 178 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 PDAP1Q13442 181 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 CASP8Q14790 479 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 UBXN2BQ14CS0 331 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 ZCWPW2Q504Y3 356 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 GKAP1Q5VSY0 366 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 MFSD5Q6N075 450 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 LCLAT1Q6UWP7 414 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 COLGALT1Q8NBJ5 622 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 LRRC15Q8TF66 581 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 BAP1Q92560 729 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 GPR62Q9BZJ7 368 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 CAND2O75155 1236 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 ERBB2P04626 1255 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 HIST1H2AGP0C0S8 130 aaPredicted RBP8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 PIRTP0C851 137 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 GOT1P17174 413 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 HIST1H2ADP20671 130 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 DEFB103AP81534 67 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 NNTQ13423 1086 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 DOK6Q6PKX4 331 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 TRIM48Q8IWZ4 208 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 PDCD7Q8N8D1 485 aaKnown RBP8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 SGF29Q96ES7 293 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 HIST1H2AHQ96KK5 128 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 RIPOR3Q96MK2 946 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 HIST1H2AJQ99878 128 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 H2AFJQ9BTM1 129 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 ZFP14Q9HCL3 533 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 DMAC2Q9NW81 257 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 MRFAP1Q9Y605 127 aa8.71□□□□□ -1.02
CRNKL1-202ENST00000377340 A0A0U1RQJ8 604 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 CCDC195A0A1B0GUA6 201 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TIMP1P01033 207 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 POLBP06746 335 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PFKMP08237 780 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 ERCC2P18074 760 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TGM2P21980 687 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PAX3P23760 479 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 MAP4P27816 1152 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 ZNF143P52747 638 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 GEMP55040 296 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 MARSP56192 900 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 C2orf27AQ580R0 203 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 EMBQ6PCB8 327 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PCDHB18PQ96TA0 734 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 NKX2-4Q9H2Z4 354 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 GTSE1Q9NYZ3 720 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TCHHQ07283 1943 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 NRAPQ86VF7 1730 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 FRMD3A2A2Y4 597 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 YJEFN3A6XGL0 299 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PDZK1P1A8MUH7 402 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 E7ENQ6 273 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 RBAK-RBAKDNI3L0D1 243 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 SPAG7O75391 227 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PAGE1O75459 146 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms