RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 MFSD11O43934 449 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 TADA2AO75478 443 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 PDE5AO76074 875 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 SNRPAP09012 282 aaKnown RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 NUDT17P0C025 328 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 BCAT1P54687 386 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 BST2Q10589 180 aaKnown RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 ARL13BQ3SXY8 428 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 CERCAMQ5T4B2 595 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 B3GALNT2Q8NCR0 500 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 SPATA22Q8NHS9 363 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 CCDC97Q96F63 343 aaPredicted RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 KLHL5Q96PQ7 755 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 LRFN2Q9ULH4 789 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 VANGL2Q9ULK5 521 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 PTPN1P18031 435 aaKnown RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 STX3Q13277 289 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 TARBP2Q15633 366 aaKnown RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 C9orf57Q5W0N0 161 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 OTOP3Q7RTS5 596 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 CIR1Q86X95 450 aaPredicted RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 SERAC1Q96JX3 654 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 C12orf42Q96LP6 360 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 TSC22D3Q99576 134 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 ASB7Q9H672 318 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 NCF1BA6NI72 391 aaPredicted RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 NCF1CA8MVU1 366 aaPredicted RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 NCF1P14598 390 aaPredicted RBP12.03□□□□□ -0.48
DDR1-227ENST00000376570 CYP3A5P20815 502 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 NOMO1Q15155 1222 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 NOMO2Q5JPE7 1267 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 C1orf146Q5VVC0 180 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 BBS12Q6ZW61 710 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 STRA8Q7Z7C7 330 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 TTC8Q8TAM2 541 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 E2F7Q96AV8 911 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 HDAC11Q96DB2 347 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 APBA2Q99767 749 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 DLGAP2Q9P1A6 1054 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 V9GYQ6 96 aa12.03□□□□□ -0.48
DDR1-227ENST00000376570 MYADML2A6NDP7 307 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 YJEFN3A6XGL0 299 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 E7ENQ6 273 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 B4GALT4O60513 344 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 OPHN1O60890 802 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 TAC1P20366 129 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 ICAM3P32942 547 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 RTP1P59025 263 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 NR1H3Q13133 447 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 CUL3Q13618 768 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 ZNF460Q14592 562 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 N4BP2L1Q5TBK1 243 aaPredicted RBP12.02□□□□□ -0.48
DDR1-227ENST00000376570 SYDE1Q6ZW31 735 aaPredicted RBP12.02□□□□□ -0.48
DDR1-227ENST00000376570 OTOAQ7RTW8 1153 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 TRABD2AQ86V40 505 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 ECHDC2Q86YB7 292 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 ARFGAP1Q8N6T3 406 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 SLC26A7Q8TE54 656 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 HTR3CQ8WXA8 447 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 PDLIM7Q9NR12 457 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 TRMT13Q9NUP7 481 aaKnown RBP12.02□□□□□ -0.48
DDR1-227ENST00000376570 TXLNGQ9NUQ3 528 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 DNAJC16Q9Y2G8 782 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 AK5Q9Y6K8 562 aa12.02□□□□□ -0.48
DDR1-227ENST00000376570 TBX18O95935 607 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 PGM1P36871 562 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 SERPINB5P36952 375 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 TSPY1Q01534 308 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 ASPHQ12797 758 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 CTBP1Q13363 440 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 THEMIS2Q5TEJ8 643 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 RGS9BPQ6ZS82 235 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 PTAR1Q7Z6K3 402 aaPredicted RBP12.02□□□□□ -0.49
DDR1-227ENST00000376570 CKAP2Q8WWK9 683 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 VCPIP1Q96JH7 1222 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 TRPC7Q9HCX4 862 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 ITGA11Q9UKX5 1188 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 MAP1BP46821 2468 aaKnown RBP12.02□□□□□ -0.49
DDR1-227ENST00000376570 CNMDO75829 334 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 RASSF9O75901 435 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 MT-CYBP00156 380 aaPredicted RBP12.02□□□□□ -0.49
DDR1-227ENST00000376570 ERCC2P18074 760 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 TKTP29401 623 aaKnown RBP12.02□□□□□ -0.49
DDR1-227ENST00000376570 SERPINB4P48594 390 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 FLT3LGP49771 235 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 GPX6P59796 221 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 HTRA3P83110 453 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 GRAMD1BQ3KR37 738 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 SV2CQ496J9 727 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 SLC39A12Q504Y0 691 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 RNASEH2BQ5TBB1 312 aaKnown RBP12.02□□□□□ -0.49
DDR1-227ENST00000376570 ATAD1Q8NBU5 361 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 ATXN2LQ8WWM7 1075 aaKnown RBP12.02□□□□□ -0.49
DDR1-227ENST00000376570 CCT6BQ92526 530 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 TLCD1Q96CP7 247 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 PHF21BQ96EK2 531 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 GBP5Q96PP8 586 aa12.02□□□□□ -0.49
DDR1-227ENST00000376570 NDNQ99608 321 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms