RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 MYL4P12829 197 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 HTR7P34969 479 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 GTF2F1P35269 517 aaKnown RBP eCLIP17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 CCR2P41597 374 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 SLC7A9P82251 487 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 LONRF2Q1L5Z9 754 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 ACBD5Q5T8D3 534 aaPredicted RBP17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 MANEALQ5VSG8 457 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 NUGGCQ68CJ6 796 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 BBS12Q6ZW61 710 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 PDZD4Q76G19 769 aaPredicted RBP17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 MIB1Q86YT6 1006 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 MAIP1Q8WWC4 291 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 KLF16Q9BXK1 252 aaPredicted RBP17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 PRDM16Q9HAZ2 1276 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 TMPRSS4Q9NRS4 437 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 CCDC195A0A1B0GUA6 201 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 A0A1W2PRU2 124 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 H3BRJ5 948 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 PAGE1O75459 146 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 SLU7O95391 586 aaKnown RBP17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 HOXC13P31276 330 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 HCAR3P49019 387 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 COG7P83436 770 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 CYP4F8P98187 520 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 COL19A1Q14993 1142 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 CYP1B1Q16678 543 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 ARTNQ5T4W7 220 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 PRPF38BQ5VTL8 546 aaKnown RBP17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 SPATA4Q8NEY3 305 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 RNF34Q969K3 372 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 AZIN2Q96A70 460 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 BTN2A3PQ96KV6 586 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 CSPG4P5Q96PW8 444 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 CALN1Q9BXU9 219 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 NACA2Q9H009 215 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 RNF38Q9H0F5 515 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 ATXN3LQ9H3M9 355 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 NEU3Q9UQ49 428 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 NOTCH4Q99466 2003 aa17.84■□□□□ 0.45
HLA-DMA-201ENST00000374843 TRAV19A0A0A6YYK7 116 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 TCRBV7S2A1N4TA0A589 114 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 CTAGE15A4D2H0 777 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 CCDC188H7C350 402 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 TJP3O95049 919 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 LATS1O95835 1130 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 CTAGE8P0CG41 777 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 MMRN1Q13201 1228 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 DPYSQ14117 519 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 TFDP2Q14188 446 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 SLC5A9Q2M3M2 681 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 ANKRD20A8PQ5CZ79 823 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 PPP6R3Q5H9R7 873 aaPredicted RBP17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 ZNF697Q5TEC3 545 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 TXNDC8Q6A555 127 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 SLC9A4Q6AI14 798 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 ANKRD54Q6NXT1 300 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 CTAGE6Q86UF2 777 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 UNC45BQ8IWX7 931 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 CTAGE4Q8IX94 777 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 ZDHHC14Q8IZN3 488 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 PYROXD2Q8N2H3 581 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 ATP6V0D2Q8N8Y2 350 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 C12orf50Q8NA57 414 aaPredicted RBP17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 SMG7Q92540 1137 aaKnown RBP17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 C1orf74Q96LT6 269 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 RNF157Q96PX1 679 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 SLC22A12Q96S37 553 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 EPAS1Q99814 870 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 PRDM12Q9H4Q4 367 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 TRPC7Q9HCX4 862 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 CWC15Q9P013 229 aaKnown RBP17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 MTCH2Q9Y6C9 303 aa17.83■□□□□ 0.44
HLA-DMA-201ENST00000374843 GOLGA6L10A0A0M3HER8 536 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 FAM72CH0Y354 149 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 KRIT1O00522 736 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 ZNF197O14709 1029 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 STC2O76061 302 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 KRT10P13645 584 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 HOXB8P17481 243 aaPredicted RBP17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 ARL4AP40617 200 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 ADCY2Q08462 1091 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 GRIN2CQ14957 1233 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 ARHGAP15Q53QZ3 475 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 FAM72AQ5TYM5 149 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 PIK3R6Q5UE93 754 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 FAM72DQ6L9T8 149 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 GRASPQ7Z6J2 395 aaPredicted RBP17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 FAM72BQ86X60 149 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 ZNF683Q8IZ20 524 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 PQLC3Q8N755 202 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 PRELID2Q8N945 189 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 LRRN4CLQ8ND94 238 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 PCDH19Q8TAB3 1148 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 TCEAL4Q96EI5 215 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 PRMT1Q99873 361 aaKnown RBP17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 HEMGNQ9BXL5 484 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 MAGEB5Q9BZ81 275 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 TASP1Q9H6P5 420 aa17.82■□□□□ 0.44
HLA-DMA-201ENST00000374843 ARHGEF4Q9NR80 690 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms