RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 PDIA6Q15084 440 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 METTL16Q86W50 562 aaKnown RBP8.58□□□□□ -1.04
HSPG2-203ENST00000374695 SNX8Q9Y5X2 465 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 NUP205Q92621 2012 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L15C9J2P7 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L13C9JLJ4 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L11C9JVI0 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L18D6R9N7 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L22D6RA61 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L17D6RBQ6 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L19D6RCP7 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L20D6RJB6 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L24Q0WX57 530 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF284Q2VY69 593 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 IRAK1BP1Q5VVH5 260 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 USP17L6PQ6QN14 398 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TSHZ1Q6ZSZ6 1077 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 ZCWPW1Q9H0M4 648 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 SHOC2Q9UQ13 582 aa8.58□□□□□ -1.04
HSPG2-203ENST00000374695 TPRP12270 2363 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 KHDRBS3O75525 346 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 FAUP35544 74 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 CAPGP40121 348 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 LRRC34Q8IZ02 419 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 PIK3C3Q8NEB9 887 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 ACTRT2Q8TDY3 377 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 INO80Q9ULG1 1556 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 EPN2O95208 641 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 RARGP13631 454 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 ACAD10Q6JQN1 1059 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 KYAT3Q6YP21 454 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 DEFB107AQ8IZN7 70 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 MYLPFQ96A32 169 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 RERGLQ9H628 205 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SAGE2PA6NJ88 616 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 FBXO21O94952 628 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 LSM8O95777 96 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 NR6A1Q15406 480 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 HPDLQ96IR7 371 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 WDCPQ9H6R7 721 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 NMRK2Q9NPI5 230 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 IGSF1Q8N6C5 1336 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SKAP2O75563 359 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 XKR3Q5GH77 459 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF554Q86TJ5 538 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 OR6Y1Q8NGX8 325 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 FAM120BQ96EK7 910 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 TMEM216Q9P0N5 145 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SLAIN2Q9P270 581 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 CYP2A7P20853 494 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 EMC2Q15006 297 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SYTL1Q8IYJ3 562 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 PRKD2Q9BZL6 878 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 GPRC5DQ9NZD1 345 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 GTF3C4Q9UKN8 822 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 ERVK-7P63135 1459 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 F9P00740 461 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 RENBPP51606 427 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 VPS72Q15906 364 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 RPTNQ6XPR3 784 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 STRA8Q7Z7C7 330 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 CHPFQ8IZ52 775 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 PGBD3Q8N328 593 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 B3GALNT2Q8NCR0 500 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 TRPV3Q8NET8 790 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 LRRC7Q96NW7 1537 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 PCNAP12004 261 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SLC1A6P48664 564 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 MB21D2Q8IYB1 491 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SLC25A41Q8N5S1 370 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 OTUD5Q96G74 571 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 RPS6KA6Q9UK32 745 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 GLP2RO95838 553 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 RHAGQ02094 409 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 KCNB2Q92953 911 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 ZKSCAN4Q969J2 545 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SEPT5Q99719 369 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 OXCT2Q9BYC2 517 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 ZNF518BQ9C0D4 1074 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 ROGDIQ9GZN7 287 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 BICRAQ9NZM4 1560 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 H3BN98 237 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 HS6ST1O60243 411 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SNAP91O60641 907 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 STAU1O95793 577 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 SMIM11AP58511 58 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 TRIT1Q9H3H1 467 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 PHF11Q9UIL8 331 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 TMA7Q9Y2S6 64 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 WFS1O76024 890 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 RPL3P39023 403 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 GSTM5P46439 218 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 FASTKQ14296 549 aaKnown RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 C8orf59Q8N0T1 100 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-203ENST00000374695 TTLL6Q8N841 843 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 AP3D1O14617 1153 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 LARGE1O95461 756 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 PDGFRBP09619 1106 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 IL12AP29459 219 aa8.57□□□□□ -1.04
HSPG2-203ENST00000374695 QRICH1Q2TAL8 776 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms