RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 TJP3O95049 919 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 LUC7L3O95232 432 aaKnown RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 SEC24AO95486 1093 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 AGTP01019 485 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ADH1AP07327 375 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 PTPN7P35236 360 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ADCY8P40145 1251 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 LHX1P48742 406 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 OGDHQ02218 1023 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 DLX2Q07687 328 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 BLMHQ13867 455 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 DUSP6Q16828 381 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 PTPN20Q4JDL3 420 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 MDH1BQ5I0G3 518 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 INTS6LQ5JSJ4 861 aaKnown RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 SLC8B1Q6J4K2 584 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 PDE12Q6L8Q7 609 aaKnown RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 C12orf76Q8N812 135 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 CCDC63Q8NA47 563 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 STKLD1Q8NE28 680 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 TMEM176AQ96HP8 235 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 SLITRK1Q96PX8 696 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 SYT15Q9BQS2 421 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 KIF9Q9HAQ2 790 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 LRRC4CQ9HCJ2 640 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.82□□□□□ -0.047e-16■■□□□ 11.5
HMGA1-203ENST00000374116 FAM49BQ9NUQ9 324 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ABI2Q9NYB9 513 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-203ENST00000374116 FNIP2Q9P278 1114 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ANAPC5Q9UJX4 755 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 SSX2IPQ9Y2D8 614 aa14.82□□□□□ -0.04
HMGA1-203ENST00000374116 ARHGEF37A1IGU5 675 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 EME2A4GXA9 379 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-203ENST00000374116 GLP2RO95838 553 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 RPSAP08865 295 aaKnown RBP14.81□□□□□ -0.04
HMGA1-203ENST00000374116 PAX3P23760 479 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 GJC1P36383 396 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 ITGA8P53708 1063 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 CNGA2Q16280 664 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 PDCD2Q16342 344 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-203ENST00000374116 DRICH1Q6PGQ1 229 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-203ENST00000374116 CCDC25Q86WR0 208 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 TTC39CQ8N584 583 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 CCDC197Q8NCU1 140 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 ACBD6Q9BR61 282 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 ZCWPW1Q9H0M4 648 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 CLDND1Q9NY35 253 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 LMCD1Q9NZU5 365 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 CDH22Q9UJ99 828 aa14.81□□□□□ -0.04
HMGA1-203ENST00000374116 TLDC2A0PJX2 215 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 A6NHS1 94 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 OR6C75A6NL08 312 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 RASGRF2O14827 1237 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 GLUD1P00367 558 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 KRT1P04264 644 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 VDRP11473 427 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CCDC130P13994 396 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 PTPN1P18031 435 aaKnown RBP14.8□□□□□ -0.04
HMGA1-203ENST00000374116 POU3F3P20264 500 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-203ENST00000374116 GABRB2P47870 512 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 TSPY1Q01534 308 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 DUSP4Q13115 394 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 RAB33AQ14088 237 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 SLC5A9Q2M3M2 681 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 ERMARDQ5T6L9 678 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 HIBCHQ6NVY1 386 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CEP128Q6ZU80 1094 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 ANKS1BQ7Z6G8 1248 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 B3GALNT2Q8NCR0 500 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 ZNF461Q8TAF7 563 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CHMP6Q96FZ7 201 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CDC42EP4Q9H3Q1 356 aaKnown RBP14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CYP4F11Q9HBI6 524 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 PRDM6Q9NQX0 595 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 MAN1C1Q9NR34 630 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 WDR35Q9P2L0 1181 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 BAIAP2L1Q9UHR4 511 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.8□□□□□ -0.04
HMGA1-203ENST00000374116 DOCK6Q96HP0 2047 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 MTMR11A4FU01 709 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 F8VP50 259 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 RFPL2O75678 378 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 ANP32DO95626 131 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CD19P15391 556 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CCND1P24385 295 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CYP2F1P24903 491 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 PCSK1P29120 753 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 GPD2P43304 727 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 GPR15P49685 360 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 TRIP13Q15645 432 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-203ENST00000374116 CMPK2Q5EBM0 449 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 TNFAIP8L3Q5GJ75 292 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 ZFYVE27Q5T4F4 411 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 SDHAF4Q5VUM1 108 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 LILRA6Q6PI73 481 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 SPOCD1Q6ZMY3 1216 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 POLNQ7Z5Q5 900 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 GPR152Q8TDT2 470 aa14.8□□□□□ -0.04
HMGA1-203ENST00000374116 FNIP1Q8TF40 1166 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms