RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 KATNA1O75449 491 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SKAP2O75563 359 aaPredicted RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 CPA3P15088 417 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 RAP1GAPP47736 663 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 RAD23AP54725 363 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SLC6A3Q01959 620 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ALDH6A1Q02252 535 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 NFYCQ13952 458 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 CBWD3Q5JTY5 395 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 CBWD5Q5RIA9 395 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 NT5DC3Q86UY8 548 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PAFAH2Q99487 392 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SEMA6BQ9H3T3 888 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PARVBQ9HBI1 364 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 VTI1BQ9UEU0 232 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 FAM153AQ9UHL3 310 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 TMCO1Q9UM00 188 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PADI4Q9UM07 663 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SF3B1O75533 1304 aaKnown RBP eCLIP11.37□□□□□ -0.595e-6■■■■■ 74.7
PHACTR4-202ENST00000373839 PGAM1P18669 254 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 HSD17B3P37058 310 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 NUP107P57740 925 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ADIGQ0VDE8 80 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ORC1Q13415 861 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ARMC12Q5T9G4 340 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 RFX8Q6ZV50 586 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 USP45Q70EL2 814 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 UBE2E3Q969T4 207 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PCDHA3Q9Y5H8 950 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 CCDC189A1A4V9 331 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 TNNI3P19429 210 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SKIV2L2P42285 1042 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 NFIL3Q16649 462 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PAGE2BQ5JRK9 111 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SCARA3Q6AZY7 606 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ACSF2Q96CM8 615 aaPredicted RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 MFSD1Q9H3U5 465 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 IL1RL2Q9HB29 575 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 TBC1D23Q9NUY8 699 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 LOC100653049A0A140TA62 436 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 TK2O00142 265 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 O00370 1275 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CES2O00748 559 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 KRT34O76011 436 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 LTFP02788 710 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 PCNAP12004 261 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 SLC16A1P53985 500 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 LAYNQ6UX15 382 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 BNC2Q6ZN30 1099 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 SYTL1Q8IYJ3 562 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 ACTL9Q8TC94 416 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 HTR3CQ8WXA8 447 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 BSNDQ8WZ55 320 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 RPRD1BQ9NQG5 326 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 DDX28Q9NUL7 540 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 PTPRAP18433 802 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CHKAP35790 457 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 RANBP1P43487 201 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 ICE2Q659A1 982 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 A1CFQ9NQ94 594 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 MEGF6O75095 1541 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 ATP5C1P36542 298 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 TRIP4Q15650 581 aaPredicted RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 GALNTL6Q49A17 601 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CAPRIN2Q6IMN6 1127 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 LRRC39Q96DD0 335 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 FAM120BQ96EK7 910 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 POLR1EQ9GZS1 481 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 MAF1Q9H063 256 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CNPP09543 421 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CSH1P0DML2 217 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CSH2P0DML3 217 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 THOP1P52888 689 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 NCF4Q15080 339 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 FNDC3BQ53EP0 1204 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 WDR93Q6P2C0 686 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 KDM7AQ6ZMT4 941 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 LGI2Q8N0V4 545 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 OR56A4Q8NGH8 313 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 HSFY1Q96LI6 401 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 APBA2Q99767 749 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CAPN10Q9HC96 672 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 BCL9O00512 1426 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 TRAV19A0A0A6YYK7 116 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 FAM220BPB1ANY3 271 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 C1QTNF3-AMACRE9PGA6 284 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 KPNA5O15131 536 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CLTBP09497 229 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 PABPC1P11940 636 aaKnown RBP11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 C4BPBP20851 252 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 IYDQ6PHW0 289 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 CATSPERGQ6ZRH7 1159 aa11.36□□□□□ -0.59
PHACTR4-202ENST00000373839 DNAJC9Q8WXX5 260 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms