RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 ACSL3O95573 720 aa16.24■□□□□ 0.19
HDAC8-209ENST00000373589 MAGEA4P43358 317 aa16.24■□□□□ 0.19
HDAC8-209ENST00000373589 ALDH7A1P49419 539 aaKnown RBP16.24■□□□□ 0.19
HDAC8-209ENST00000373589 ZNF135P52742 658 aaPredicted RBP16.24■□□□□ 0.19
HDAC8-209ENST00000373589 MON1AQ86VX9 555 aa16.24■□□□□ 0.19
HDAC8-209ENST00000373589 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
HDAC8-209ENST00000373589 SPPL2BQ8TCT7 592 aa16.24■□□□□ 0.19
HDAC8-209ENST00000373589 TOP1MTQ969P6 601 aa16.24■□□□□ 0.19
HDAC8-209ENST00000373589 ARHGEF38Q9NXL2 777 aa16.24■□□□□ 0.19
HDAC8-209ENST00000373589 A0A1W2PQH9 124 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 TCRBV7S3A2A0A539 114 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 ALOX15BO15296 676 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 CPB1P15086 417 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 ITGB8P26012 769 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 USP46P62068 366 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 RNF19BQ6ZMZ0 732 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 CROCCP2Q86T23 111 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 STKLD1Q8NE28 680 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 UHMK1Q8TAS1 419 aaKnown RBP16.23■□□□□ 0.19
HDAC8-209ENST00000373589 C2orf15Q8WU43 125 aaKnown RBP16.23■□□□□ 0.19
HDAC8-209ENST00000373589 CASP10Q92851 521 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 ZNF689Q96CS4 500 aaPredicted RBP16.23■□□□□ 0.19
HDAC8-209ENST00000373589 PGM2Q96G03 612 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 ROPN1BQ9BZX4 212 aaPredicted RBP16.23■□□□□ 0.19
HDAC8-209ENST00000373589 OSBPL2Q9H1P3 480 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 CRISPLD1Q9H336 500 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 ROPN1Q9HAT0 212 aaPredicted RBP16.23■□□□□ 0.19
HDAC8-209ENST00000373589 SAYSD1Q9NPB0 183 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 OSER1Q9NX31 292 aa16.23■□□□□ 0.19
HDAC8-209ENST00000373589 TRIM43BA6NCK2 446 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 C5orf60A6NFR6 353 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 GCATO75600 419 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TMEM63AO94886 807 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TIMP1P01033 207 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 HAPLN1P10915 354 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 HSPA8P11142 646 aaKnown RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 ERCC2P18074 760 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 ACTN2P35609 894 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 ARPP19P56211 112 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 GAD2Q05329 585 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 KCNJ11Q14654 390 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 PKN2Q16513 984 aaKnown RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 BRMS1LQ5PSV4 323 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 C4orf22Q6V702 233 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 LRRN4Q8WUT4 740 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TRIM43Q96BQ3 446 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 IGSF21Q96ID5 467 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 SPATA17Q96L03 361 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 C9orf72Q96LT7 481 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 VN1R3Q9BXE9 311 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 CENPHQ9H3R5 247 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 MTRRQ9UBK8 725 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 OR12D3Q9UGF7 316 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 LTBP2Q14767 1821 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 PLXNA3P51805 1871 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 E7ESA3 106 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 CHADO15335 359 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TCEA3O75764 348 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 ABHD2P08910 425 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 MAGEA6P43360 314 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TPI1P60174 286 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 BASP1P80723 227 aaKnown RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 CBLBQ13191 982 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 PRKD1Q15139 912 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 HIF1AQ16665 826 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 USP41Q3LFD5 358 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 C6orf118Q5T5N4 469 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 SLC8B1Q6J4K2 584 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 MSANTD2Q6P1R3 559 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 PRSS55Q6UWB4 352 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 DENND5BQ6ZUT9 1274 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 CENPUQ71F23 418 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 ARHGAP18Q8N392 663 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TAB3Q8N5C8 712 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TFB1MQ8WVM0 346 aaKnown RBP16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TLCD1Q96CP7 247 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TTC25Q96NG3 672 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 EPAS1Q99814 870 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 TMEM51Q9NW97 253 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 SFMBT1Q9UHJ3 866 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 SLC27A5Q9Y2P5 690 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 BACE2Q9Y5Z0 518 aa16.22■□□□□ 0.19
HDAC8-209ENST00000373589 GOLGA8MH3BSY2 632 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 KIAA0355O15063 1070 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 EIF3HO15372 352 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDAC8-209ENST00000373589 SOAT2O75908 522 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 VAV1P15498 845 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 ARL4CP56559 192 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 SKOR1P84550 965 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 PPP2R5DQ14738 602 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 FASTKD3Q14CZ7 662 aaKnown RBP16.21■□□□□ 0.19
HDAC8-209ENST00000373589 PDK1Q15118 436 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 FNBP1LQ5T0N5 605 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 KDM7AQ6ZMT4 941 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 CCDC33Q8N5R6 958 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 FBXO22Q8NEZ5 403 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 CCDC110Q8TBZ0 833 aa16.21■□□□□ 0.19
HDAC8-209ENST00000373589 EPS8L3Q8TE67 593 aaKnown RBP16.21■□□□□ 0.19
HDAC8-209ENST00000373589 RNF34Q969K3 372 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms