RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 TSPY1Q01534 308 aa11.52□□□□□ -0.57
HDLBP-202ENST00000373292 GABPB1Q06547 395 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-202ENST00000373292 GPS2Q13227 327 aa11.52□□□□□ -0.57
HDLBP-202ENST00000373292 SYDE1Q6ZW31 735 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-202ENST00000373292 SPRED2Q7Z698 418 aa11.52□□□□□ -0.57
HDLBP-202ENST00000373292 MPP5Q8N3R9 675 aa11.52□□□□□ -0.57
HDLBP-202ENST00000373292 GIPC2Q8TF65 315 aa11.52□□□□□ -0.57
HDLBP-202ENST00000373292 GORASP1Q9BQQ3 440 aa11.52□□□□□ -0.57
HDLBP-202ENST00000373292 NYNRINQ9P2P1 1898 aaKnown RBP11.52□□□□□ -0.57
HDLBP-202ENST00000373292 DCLK1O15075 740 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 LRIG2O94898 1065 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 CSPG5O95196 566 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 IGLV3-25P01717 112 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 F7P08709 466 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-202ENST00000373292 MYZAPP0CAP1 466 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 SRGAP2BP0DMP2 458 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 ERCC2P18074 760 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 ATF6P18850 670 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 YWHAGP61981 247 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDLBP-202ENST00000373292 PDIA2Q13087 525 aaKnown RBP11.51□□□□□ -0.57
HDLBP-202ENST00000373292 LRIG3Q6UXM1 1119 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 RFX8Q6ZV50 586 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 ZNF534Q76KX8 674 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 NPAS4Q8IUM7 802 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 THEM5Q8N1Q8 247 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 CELF6Q96J87 481 aaKnown RBP11.51□□□□□ -0.57
HDLBP-202ENST00000373292 BEGAINQ9BUH8 593 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 ETNK1Q9HBU6 452 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 FEZ2Q9UHY8 353 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-202ENST00000373292 LRFN2Q9ULH4 789 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 CDY1Q9Y6F8 540 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 WDR27A2RRH5 827 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 DGKIO75912 1065 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 IFFO1Q0D2I5 559 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 C14orf80Q86SX3 495 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 FAM76AQ8TAV0 307 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 ACBD3Q9H3P7 528 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 PRDM12Q9H4Q4 367 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 ELAC1Q9H777 363 aaKnown RBP11.51□□□□□ -0.57
HDLBP-202ENST00000373292 KIF9Q9HAQ2 790 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 RAB6BQ9NRW1 208 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 GMIPQ9P107 970 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 OR12D3Q9UGF7 316 aa11.51□□□□□ -0.57
HDLBP-202ENST00000373292 MTMR11A4FU01 709 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 GOLGA8KD6RF30 607 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 OPA1O60313 960 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 EFEMP2O95967 443 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 CXCR3P49682 368 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 CRADDP78560 199 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 MPP2Q14168 576 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 KCNJ11Q14654 390 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 CAND1Q86VP6 1230 aaKnown RBP11.5□□□□□ -0.57
HDLBP-202ENST00000373292 MAP7D3Q8IWC1 876 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 TLCD1Q96CP7 247 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 WDCPQ9H6R7 721 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 DSEQ9UL01 958 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 PLXNA3P51805 1871 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 NRG2O14511 850 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-202ENST00000373292 MOCS2O96007 188 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-202ENST00000373292 NR1D1P20393 614 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 SEC24CP53992 1094 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 C16orf59Q7L2K0 433 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-202ENST00000373292 DNAI2Q9GZS0 605 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 PRDM5Q9NQX1 630 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-202ENST00000373292 TMEM39AQ9NV64 488 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 MPP6Q9NZW5 540 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 SLC12A6Q9UHW9 1150 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 FBXO21O94952 628 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 WASHC5Q12768 1159 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 TFDP2Q14188 446 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 UNC5BQ8IZJ1 945 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 KLC2Q9H0B6 622 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 MLXIPLQ9NP71 852 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 STAP1Q9ULZ2 295 aa11.5□□□□□ -0.57
HDLBP-202ENST00000373292 DOCK4Q8N1I0 1966 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 EEF2KO00418 725 aaKnown RBP11.49□□□□□ -0.57
HDLBP-202ENST00000373292 SEC24AO95486 1093 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 APRTP07741 180 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 CPB1P15086 417 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 TGM2P21980 687 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 LBX1P52954 281 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 SNX16P57768 344 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 SF3A3Q12874 501 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■□□ 17.8
HDLBP-202ENST00000373292 SLMAPQ14BN4 828 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 MORF4L2Q15014 288 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 ARHGEF6Q15052 776 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 TNFAIP8L3Q5GJ75 292 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 OTOP2Q7RTS6 562 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 PRPF39Q86UA1 669 aaKnown RBP11.49□□□□□ -0.57
HDLBP-202ENST00000373292 EXOC3L1Q86VI1 746 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 GOLGA6L1Q8N7Z2 621 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 P2RY11Q96G91 374 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 IL1RAPL1Q9NZN1 696 aa11.49□□□□□ -0.57
HDLBP-202ENST00000373292 PRRC2BQ5JSZ5 2229 aaKnown RBP11.49□□□□□ -0.57
HDLBP-202ENST00000373292 BCLAF3A2AJT9 711 aaKnown RBP11.49□□□□□ -0.57
HDLBP-202ENST00000373292 SCAMP3O14828 347 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms