RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 MPPE1Q53F39 396 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 DCAF6Q58WW2 860 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 FAM133BQ5BKY9 247 aaKnown RBP20.83■□□□□ 0.93
TMEM53-205ENST00000372244 C10orf76Q5T2E6 689 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 HEATR6Q6AI08 1181 aaKnown RBP20.83■□□□□ 0.93
TMEM53-205ENST00000372244 OR6B2Q6IFH4 312 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 SLC26A9Q7LBE3 791 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 TAC4Q86UU9 113 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 CCDC33Q8N5R6 958 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 ALLCQ8N6M5 410 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 ADAM32Q8TC27 787 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 TMA16Q96EY4 203 aaKnown RBP20.83■□□□□ 0.93
TMEM53-205ENST00000372244 PCMTD1Q96MG8 357 aaPredicted RBP20.83■□□□□ 0.93
TMEM53-205ENST00000372244 SPAG5Q96R06 1193 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 PDCL3Q9H2J4 239 aa20.83■□□□□ 0.93
TMEM53-205ENST00000372244 PRRT4C9JH25 899 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 ACSL4O60488 711 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 ADAM23O75077 832 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 CAVIN2O95810 425 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 TRUB2O95900 331 aaKnown RBP20.82■□□□□ 0.92
TMEM53-205ENST00000372244 SLC11A2P49281 568 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 PITX1P78337 314 aaPredicted RBP20.82■□□□□ 0.92
TMEM53-205ENST00000372244 CDR2Q01850 454 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 RNF43Q68DV7 783 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 DEFB106AQ8N104 65 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 DDI1Q8WTU0 396 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 SLC20A1Q8WUM9 679 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 C18orf8Q96DM3 657 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 CBX8Q9HC52 389 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 ZNF292O60281 2723 aa20.82■□□□□ 0.92
TMEM53-205ENST00000372244 SGK1O00141 431 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 IRAK2O43187 625 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 KLF8O95600 359 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 CYP1A1P04798 512 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 HOXD9P28356 352 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 PXNP49023 591 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 DGKEP52429 567 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 FMO1Q01740 532 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 MPP7Q5T2T1 576 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 PIK3R6Q5UE93 754 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 NADSYN1Q6IA69 706 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 TMEM92Q6UXU6 159 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 ERICH1Q86X53 443 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 TXNDC5Q8NBS9 432 aaKnown RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 IPO4Q8TEX9 1081 aaKnown RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 CPA5Q8WXQ8 436 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 NAP1L5Q96NT1 182 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 HHIPQ96QV1 700 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 SYNCQ9H7C4 482 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 FRYLO94915 3013 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 A0A1B0GTH6 734 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 GOLGA6L7A0A1B0GV03 622 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 TSPAN3O60637 253 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 GRAP2O75791 330 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 APBB3O95704 486 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 HNRNPLP14866 589 aaKnown RBP eCLIP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 SLC6A4P31645 630 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 SCNN1AP37088 669 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 NOMO3P69849 1222 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 CDK17Q00537 523 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 NR1I3Q14994 352 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 ZSCAN23Q3MJ62 389 aa20.81■□□□□ 0.92
TMEM53-205ENST00000372244 ZC3H12AQ5D1E8 599 aaKnown RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 ZNF513Q8N8E2 541 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-205ENST00000372244 KIAA1549LQ6ZVL6 1849 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 KCNU1A8MYU2 1149 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 EOGTQ5NDL2 527 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 RFWD3Q6PCD5 774 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 TRMT11Q7Z4G4 463 aaKnown RBP20.8■□□□□ 0.92
TMEM53-205ENST00000372244 RASSF3Q86WH2 238 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 XYLT1Q86Y38 959 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 NT5C3BQ969T7 300 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 ZDHHC4Q9NPG8 344 aa20.8■□□□□ 0.92
TMEM53-205ENST00000372244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.8■□□□□ 0.92
TMEM53-205ENST00000372244 A0A1W2PQC6 194 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 GBP1P32455 592 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 NOS2P35228 1153 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 MATKP42679 507 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 SGSHP51688 502 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 SRSF5Q13243 272 aaKnown RBP20.79■□□□□ 0.92
TMEM53-205ENST00000372244 GEN1Q17RS7 908 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 FILIP1LQ4L180 1135 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 NAA35Q5VZE5 725 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 EGFLAMQ63HQ2 1017 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 LUZP1Q86V48 1076 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 TSTD1Q8NFU3 115 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 BTN2A3PQ96KV6 586 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 PCDHB18PQ96TA0 734 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 DDX50Q9BQ39 737 aaKnown RBP20.79■□□□□ 0.92
TMEM53-205ENST00000372244 MYO6Q9UM54 1294 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 CFAP54Q96N23 3096 aa20.79■□□□□ 0.92
TMEM53-205ENST00000372244 AXIN1O15169 862 aa20.78■□□□□ 0.92
TMEM53-205ENST00000372244 TIMM44O43615 452 aa20.78■□□□□ 0.92
TMEM53-205ENST00000372244 DAB1O75553 588 aa20.78■□□□□ 0.92
TMEM53-205ENST00000372244 SLC2A3P11169 496 aa20.78■□□□□ 0.92
TMEM53-205ENST00000372244 UNGP13051 313 aaPredicted RBP20.78■□□□□ 0.92
TMEM53-205ENST00000372244 MMP8P22894 467 aa20.78■□□□□ 0.92
TMEM53-205ENST00000372244 NTSR1P30989 418 aa20.78■□□□□ 0.92
TMEM53-205ENST00000372244 TRIM72Q6ZMU5 477 aa20.78■□□□□ 0.92
TMEM53-205ENST00000372244 IRF2BP2Q7Z5L9 587 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms