RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 APEX2Q9UBZ4 518 aa19.68■□□□□ 0.74
TMEM53-201ENST00000372235 HCN2Q9UL51 889 aa19.68■□□□□ 0.74
TMEM53-201ENST00000372235 DMXL1Q9Y485 3027 aa19.68■□□□□ 0.74
TMEM53-201ENST00000372235 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 NDUFS2O75306 463 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 IGLV3-27P01718 113 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 ADRB1P08588 477 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 NDUFV2P19404 249 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 ERCC5P28715 1186 aaPredicted RBP19.67■□□□□ 0.74
TMEM53-201ENST00000372235 OXTRP30559 389 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 GNA15P30679 374 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 ANP32AP39687 249 aaKnown RBP19.67■□□□□ 0.74
TMEM53-201ENST00000372235 MTIF2P46199 727 aaKnown RBP19.67■□□□□ 0.74
TMEM53-201ENST00000372235 TBX4P57082 545 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 MTA1Q13330 715 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 SYCP2LQ5T4T6 812 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 TMEFF1Q8IYR6 380 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 AHI1Q8N157 1196 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 ZNF606Q8WXB4 792 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 NOX5Q96PH1 765 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 ACOX2Q99424 681 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 LSM14BQ9BX40 385 aaKnown RBP19.67■□□□□ 0.74
TMEM53-201ENST00000372235 CIPCQ9C0C6 399 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 FBRSQ9HAH7 460 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 TMEM9BQ9NQ34 198 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 TLR6Q9Y2C9 796 aa19.67■□□□□ 0.74
TMEM53-201ENST00000372235 PLXND1Q9Y4D7 1925 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 THAP12O43422 761 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 LETM1O95202 739 aaPredicted RBP19.66■□□□□ 0.74
TMEM53-201ENST00000372235 ATP5BP06576 529 aaKnown RBP19.66■□□□□ 0.74
TMEM53-201ENST00000372235 HOXD9P28356 352 aaPredicted RBP19.66■□□□□ 0.74
TMEM53-201ENST00000372235 GEN1Q17RS7 908 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 DUOXA1Q1HG43 343 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 PEAR1Q5VY43 1037 aaPredicted RBP19.66■□□□□ 0.74
TMEM53-201ENST00000372235 SLC23A3Q6PIS1 610 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 FAM149B1Q96BN6 582 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 MRGPRX1Q96LB2 322 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 ZSWIM1Q9BR11 485 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 MIS12Q9H081 205 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 CLSTN2Q9H4D0 955 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 PRDM16Q9HAZ2 1276 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 CD248Q9HCU0 757 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 SUSD2Q9UGT4 822 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 MBD1Q9UIS9 605 aaPredicted RBP19.66■□□□□ 0.74
TMEM53-201ENST00000372235 THADAQ6YHU6 1953 aa19.66■□□□□ 0.74
TMEM53-201ENST00000372235 CEP250Q9BV73 2442 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 IGHV1OR15-9A0A0B4J2B8 117 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 LNP1A1A4G5 178 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 TM4SF5O14894 197 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 ACSL4O60488 711 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 ACADMP11310 421 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 PTK2Q05397 1052 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 ZNF33AQ06730 810 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 MAN2A1Q16706 1144 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 TRIM61Q5EBN2 209 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 KIAA1211LQ6NV74 962 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 SERPINA13PQ6UXR4 307 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 TMEM110Q86TL2 294 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 SCUBE3Q8IX30 993 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.65■□□□□ 0.74
TMEM53-201ENST00000372235 PRCCQ92733 491 aaPredicted RBP19.65■□□□□ 0.74
TMEM53-201ENST00000372235 SLC4A5Q9BY07 1137 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 SMOC1Q9H4F8 434 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 POPDC2Q9HBU9 364 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 TMEM51Q9NW97 253 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 SLC12A6Q9UHW9 1150 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 PILRBQ9UKJ0 227 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 NFE2L3Q9Y4A8 694 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 CEP83Q9Y592 693 aa19.65■□□□□ 0.74
TMEM53-201ENST00000372235 MSI1O43347 362 aaKnown RBP19.64■□□□□ 0.73
TMEM53-201ENST00000372235 APOEP02649 317 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 GLI1P08151 1106 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 SLC2A3P11169 496 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 GNSP15586 552 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 CD6P30203 668 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 USP8P40818 1118 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 IL12RB1P42701 662 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 PTGER3P43115 390 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 BPIFB4P59827 614 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 YWHAZP63104 245 aaKnown RBP19.64■□□□□ 0.73
TMEM53-201ENST00000372235 ZNF234Q14588 700 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 FUT11Q495W5 492 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 WDR45BQ5MNZ6 344 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 PIK3R6Q5UE93 754 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 TCEAL6Q6IPX3 200 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 KIAA1324Q6UXG2 1013 aaKnown RBP19.64■□□□□ 0.73
TMEM53-201ENST00000372235 HJURPQ8NCD3 748 aaPredicted RBP19.64■□□□□ 0.73
TMEM53-201ENST00000372235 TCEAL3Q969E4 200 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 CRACR2AQ9BSW2 395 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 NUP62CLQ9H1M0 184 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 RXFP3Q9NSD7 469 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 GGA2Q9UJY4 613 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 RAD54BQ9Y620 910 aa19.64■□□□□ 0.73
TMEM53-201ENST00000372235 MYO18AQ92614 2054 aaKnown RBP19.64■□□□□ 0.73
TMEM53-201ENST00000372235 CACNA1AO00555 2505 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 PIK3R2O00459 728 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 TSPAN3O60637 253 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 EPHX1P07099 455 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 ATXN3P54252 364 aaPredicted RBP19.63■□□□□ 0.73
TMEM53-201ENST00000372235 TMPRSS6Q8IU80 811 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms