RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 SUGP1Q8IWZ8 645 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 OTUB1Q96FW1 271 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PNMA5Q96PV4 448 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 ANKZF1Q9H8Y5 726 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 C2orf81A6NN90 581 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 STX7O15400 261 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 DLGAP3O95886 979 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 TCN1P20061 433 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 ATXN3P54252 364 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 BTN3A2P78410 334 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 FIGNQ5HY92 759 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 EARS2Q5JPH6 523 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PORCNQ9H237 461 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 ATXN3LQ9H3M9 355 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 AP4S1Q9Y587 144 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLEKP08567 350 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 NDST1P52848 882 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 TRIM71Q2Q1W2 868 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 TRIM48Q8IWZ4 208 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PEX5LQ8IYB4 626 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 SPATA16Q9BXB7 569 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 FRMD8P1Q9BZ68 369 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PRDM16Q9HAZ2 1276 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 TRPC5OSA6NMA1 111 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 ACADMP11310 421 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 IGFBP4P22692 258 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 ACAT1P24752 427 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLA2G4CQ9UP65 541 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 RTN3O95197 1032 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 RARGP13631 454 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 ATP6V1B1P15313 513 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 MTA1Q13330 715 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 RRM2BQ7LG56 351 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 ARID3BQ8IVW6 561 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 SNX31Q8N9S9 440 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 SKA1Q96BD8 255 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 CD274Q9NZQ7 290 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLCL2Q9UPR0 1127 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 PMPCBO75439 489 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 CENPPQ6IPU0 288 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 GPR141Q7Z602 305 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 UROC1Q96N76 676 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 PGLYRP2Q96PD5 576 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 UBXN6Q9BZV1 441 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 TMEM134Q9H6X4 195 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZMYM2Q9UBW7 1377 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 SIGLEC1Q9BZZ2 1709 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 MAP3K13O43283 966 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 ASNA1O43681 348 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 EFCAB14O75071 495 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 IL12RB1P42701 662 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAAH2Q6GMR7 532 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLEKHM3Q6ZWE6 761 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 TAF8Q7Z7C8 310 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 SCUBE1Q8IWY4 988 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 HPS1Q92902 700 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAM162AQ96A26 154 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 SPDYE5A6NIY4 337 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 H2AFYO75367 372 aaKnown RBP13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 CALB2P22676 271 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 SLC12A3P55017 1021 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 RUNX1T1Q06455 604 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLPPR4Q7Z2D5 763 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 TERB1Q8NA31 727 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 CATSPER2Q96P56 530 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 FTHL17Q9BXU8 183 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 CIPCQ9C0C6 399 aa13.66□□□□□ -0.22
RAPGEF1-201ENST00000372189 LOC100653049A0A140TA62 436 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 KRT34O76011 436 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 HMGCRP04035 888 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZBTB48P10074 688 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 FLT3LGP49771 235 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 C1orf94Q6P1W5 598 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 TXNDC11Q6PKC3 985 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAM180AQ6UWF9 173 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 SLC47A2Q86VL8 602 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 PURBQ96QR8 312 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZNF556Q9HAH1 456 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 VPS9D1Q9Y2B5 631 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 AAR2Q9Y312 384 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 BIRC5O15392 142 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 DGKIO75912 1065 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 YWHAQP27348 245 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 WEE1P30291 646 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 KLHL12Q53G59 568 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 COBLL1Q53SF7 1204 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 C6orf10Q5SRN2 563 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 NKX2-3Q8TAU0 364 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZNF558Q96NG5 402 aa13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 MRPL17Q9NRX2 175 aaKnown RBP13.65□□□□□ -0.22
RAPGEF1-201ENST00000372189 SOX13Q9UN79 622 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms