RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ERO1BQ86YB8 467 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 SPPL2AQ8TCT8 520 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 TMEM237Q96Q45 408 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 BTBD10Q9BSF8 475 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 SLC2A4P14672 509 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 S100GP29377 79 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 BTN3A2P78410 334 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 UTS2BQ765I0 119 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 APBB2Q92870 758 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 BTBD7Q9P203 1132 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 MED14O60244 1454 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 BMP10O95393 424 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 ENO2P09104 434 aaPredicted RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 FASTKQ14296 549 aaKnown RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 STARD3Q14849 445 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 CBWD2Q8IUF1 395 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 NFKBIZQ9BYH8 718 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 MAP10Q9P2G4 905 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 WBP11Q9Y2W2 641 aaKnown RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 TPRKBQ9Y3C4 175 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 AREL1O15033 823 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 HBP1O60381 514 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 ARHGDIBP52566 201 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 ITGA1P56199 1179 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 ARF3P61204 181 aaPredicted RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 ARF1P84077 181 aaKnown RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 SNAPC2Q13487 334 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 TMEM132CQ8N3T6 1108 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 FBXO32Q969P5 355 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 C1orf50Q9BV19 199 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 TARS2Q9BW92 718 aaKnown RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 PRKAG3Q9UGI9 489 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 SIK3Q9Y2K2 1263 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 STARD13Q9Y3M8 1113 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 VIRMAQ69YN4 1812 aaKnown RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 A2ML1A8K2U0 1454 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 MPP3Q13368 585 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 TKFCQ3LXA3 575 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 HMG20AQ9NP66 347 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 NT5MQ9NPB1 228 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 FOXN3O00409 490 aaPredicted RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 FGFR2P21802 821 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 FGFR3P22607 806 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 GLRA4Q5JXX5 417 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 PTAR1Q7Z6K3 402 aaPredicted RBP12.75□□□□□ -0.37
HCFC1-202ENST00000369984 ACOT1Q86TX2 421 aa12.75□□□□□ -0.37
HCFC1-202ENST00000369984 RNASEH1O60930 286 aaKnown RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 IRAK1BP1Q5VVH5 260 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 UGT2B28Q9BY64 529 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ENTPD7Q9NQZ7 604 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 UBA2Q9UBT2 640 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 TUBE1Q9UJT0 475 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 GTF3C4Q9UKN8 822 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 C19orf81C9J6K1 198 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 TSPAN19P0C672 248 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 RAG1P15918 1043 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 TGFBR2P37173 567 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 RAP1GAPP47736 663 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ABATP80404 500 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 MAD2L1Q13257 205 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 POU6F1Q14863 301 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 C2CD6Q53TS8 623 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 DHFR2Q86XF0 187 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 AP4E1Q9UPM8 1137 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 A0A087X0T9 212 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 FAM228BP0C875 321 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 RBBP4Q09028 425 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 OSGEPL1Q9H4B0 414 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 VTI1BQ9UEU0 232 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 CYP2C9P11712 490 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 STARP49675 285 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 BCAT1P54687 386 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ADARP55265 1226 aaKnown RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 PPIDQ08752 370 aaKnown RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 FGD3Q5JSP0 725 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 SLC26A11Q86WA9 606 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 CROCCP3Q8IVE0 287 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 PRCCQ92733 491 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 FUT8Q9BYC5 575 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 UBP1Q9NZI7 540 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 NDUFAF1Q9Y375 327 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 CLTCQ00610 1675 aaKnown RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ABCA8O94911 1581 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 IQCMA0A1B0GVH7 501 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ENDOD1O94919 500 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ZSCAN18Q8TBC5 510 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 WDR60Q8WVS4 1066 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 NSMCE2Q96MF7 247 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 APOL2Q9BQE5 337 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 C17orf75Q9HAS0 396 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ANKEF1Q9NU02 776 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms