RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 RAPGEF1Q13905 1077 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 EOGTQ5NDL2 527 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 EGFLAMQ63HQ2 1017 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 NUGGCQ68CJ6 796 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 NADSYN1Q6IA69 706 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 OLFML1Q6UWY5 402 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 NUDT18Q6ZVK8 323 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 TAC4Q86UU9 113 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 UNC45BQ8IWX7 931 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 ZNF513Q8N8E2 541 aaPredicted RBP21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 C1orf131Q8NDD1 294 aaKnown RBP21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 TSTD1Q8NFU3 115 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 OLIG1Q8TAK6 271 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 BHMTQ93088 406 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 ZC3H10Q96K80 434 aaKnown RBP21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 SERPINB11Q96P15 392 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 ACOX2Q99424 681 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 GABRG3Q99928 467 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 TRIM62Q9BVG3 475 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 DAAM1Q9Y4D1 1078 aa21.38■■□□□ 1.01
SMNDC1-201ENST00000369592 A0A1W2PQF6 199 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 PES1O00541 588 aaKnown RBP21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 ACSL4O60488 711 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 RPP40O75818 363 aaKnown RBP21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 ERBB2P04626 1255 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 SLC6A4P31645 630 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 KRT9P35527 623 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 PITX1P78337 314 aaPredicted RBP21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 ENPP2Q13822 863 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 GEN1Q17RS7 908 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 MPPE1Q53F39 396 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 KIAA0907Q7Z7F0 614 aaPredicted RBP21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 NOP9Q86U38 636 aaKnown RBP21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 ZNF397Q8NF99 534 aaPredicted RBP21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 MDGA1Q8NFP4 955 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 EPS8L1Q8TE68 723 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 FAM149B1Q96BN6 582 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 ERGIC2Q96RQ1 377 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 CKAP5Q14008 2032 aa21.37■■□□□ 1.01
SMNDC1-201ENST00000369592 IRAK2O43187 625 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 RETP07949 1114 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 NTSR1P30989 418 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 GABRB2P47870 512 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 SGSHP51688 502 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 ANO6Q4KMQ2 910 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 MPP7Q5T2T1 576 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 PIK3R6Q5UE93 754 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 TMEM215Q68D42 235 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 CAVIN1Q6NZI2 390 aaKnown RBP21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 FAM183BPQ6ZVS7 135 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 SLC26A9Q7LBE3 791 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 TRMT11Q7Z4G4 463 aaKnown RBP21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 DHX40Q8IX18 779 aaKnown RBP21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 FAM160A2Q8N612 972 aaPredicted RBP21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 PARD6AQ9NPB6 346 aa21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 NOCTQ9UK39 431 aaKnown RBP21.36■■□□□ 1.01
SMNDC1-201ENST00000369592 GOLGA6L7A0A1B0GV03 622 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 TRUB2O95900 331 aaKnown RBP21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 CYBBP04839 570 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 ATP1A3P13637 1013 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 SYCP1Q15431 976 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 LPAL2Q16609 132 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 EFHC1Q5JVL4 640 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 FKBP15Q5T1M5 1219 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 PRR23BQ6ZRT6 265 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 CACNA2D4Q7Z3S7 1137 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 KBTBD6Q86V97 674 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 AOPEPQ8N6M6 819 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 ADAM32Q8TC27 787 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 DDI1Q8WTU0 396 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 TMA16Q96EY4 203 aaKnown RBP21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 MYEOVQ96EZ4 313 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 LOXL4Q96JB6 756 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 LMLNQ96KR4 655 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 NOX5Q96PH1 765 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 DLL3Q9NYJ7 618 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 NCDNQ9UBB6 729 aa21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 MUC22E2RYF6 1773 aaPredicted RBP21.35■■□□□ 1.01
SMNDC1-201ENST00000369592 KMT2BQ9UMN6 2715 aaPredicted RBP21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 TSPAN3O60637 253 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 HSF2BPO75031 334 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 LRP3O75074 770 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 CHRNB2P17787 502 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 SLC11A2P49281 568 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 POLR2FP61218 127 aaKnown RBP21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 SLC6A3Q01959 620 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 KLHL40Q2TBA0 621 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 PLK5Q496M5 336 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 ANO7Q6IWH7 933 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 RFWD3Q6PCD5 774 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 DEFB106AQ8N104 65 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 TMEM35BQ8NCS4 154 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 PRICKLE1Q96MT3 831 aaPredicted RBP21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 DUSP15Q9H1R2 295 aaPredicted RBP21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 FAM207AQ9NSI2 230 aaPredicted RBP21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 THAP10Q9P2Z0 257 aaPredicted RBP21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 RAB23Q9ULC3 237 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 NUP205Q92621 2012 aa21.34■■□□□ 1.01
SMNDC1-201ENST00000369592 THADAQ6YHU6 1953 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms