RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 NADSYN1Q6IA69 706 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 WDR59Q6PJI9 974 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 ETFBKMTQ8IXQ9 262 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 CPXM2Q8N436 756 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 CLDN23Q96B33 292 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 MRFAP1L1Q96HT8 127 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 CFAP57Q96MR6 1250 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 ZNF830Q96NB3 372 aaPredicted RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 MARK1Q9P0L2 795 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 STOML2Q9UJZ1 356 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 GFRA2O00451 464 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 ATMINO43313 823 aaPredicted RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 ACSL4O60488 711 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 MFAP3LO75121 409 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 TYRP14679 529 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 RRM1P23921 792 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 HNRNPH3P31942 346 aaKnown RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 SGSHP51688 502 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 ATXN1P54253 815 aaKnown RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 ADKP55263 362 aaKnown RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 AMPD2Q01433 879 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 KDSRQ06136 332 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 TBX2Q13207 712 aaPredicted RBP15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 GAS6Q14393 721 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 RAB6CQ53S08 254 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 Q6ZS52 159 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 UNC45BQ8IWX7 931 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 PHTF2Q8N3S3 785 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 C3orf20Q8ND61 904 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 NT5C3BQ969T7 300 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 MYEOVQ96EZ4 313 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 DNAJC7Q99615 494 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 RAB6CQ9H0N0 254 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 PIGVQ9NUD9 493 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 WDR35Q9P2L0 1181 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 RAPGEFL1Q9UHV5 662 aa15.67■□□□□ 0.1
SMPDL3A-201ENST00000368440 TULP3O75386 442 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 LATS1O95835 1130 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 CHKAP35790 457 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 ARID5BQ14865 1188 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 ADGRF1Q5T601 910 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 RFWD3Q6PCD5 774 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 ABHD10Q9NUJ1 306 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 ADAMTS1Q9UHI8 967 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 STAP1Q9ULZ2 295 aa15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 BZW2Q9Y6E2 419 aaKnown RBP15.66■□□□□ 0.1
SMPDL3A-201ENST00000368440 A0A087X0T9 212 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 CACNG3O60359 315 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 PENKP01210 267 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 FTLP02792 175 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 FAM228BP0C875 321 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 CDC25BP30305 580 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 GBP1P32455 592 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 RPS9P46781 194 aaKnown RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 GRSF1Q12849 480 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 SLC25A52Q3SY17 297 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 ARCQ7LC44 396 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 BNIPLQ7Z465 357 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 DTWD2Q8NBA8 298 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 OR8K1Q8NGG5 319 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 RXFP2Q8WXD0 754 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 PRICKLE1Q96MT3 831 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 SELENOOQ9BVL4 669 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 ANLNQ9NQW6 1124 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 CLEC4EQ9ULY5 219 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 ATG2BQ96BY7 2078 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 C2CD4BA6NLJ0 364 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 KCNU1A8MYU2 1149 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 GOLGA6L6A8MZA4 724 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 I6L893 689 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 NCAM2O15394 837 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 RTN2O75298 545 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 APOEP02649 317 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 KRT3P12035 628 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 GZMAP12544 262 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 RFC1P35251 1148 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 EIF2DP41214 584 aaKnown RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 SLC11A2P49281 568 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 ATP11AP98196 1134 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 C15orf59Q2T9L4 293 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 PPP1R15BQ5SWA1 713 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 SH3PXD2AQ5TCZ1 1133 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 DNAJC24Q6P3W2 148 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 PKN3Q6P5Z2 889 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 AZIN2Q96A70 460 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 PGAP3Q96FM1 320 aaPredicted RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 PNKPQ96T60 521 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 CHRDQ9H2X0 955 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 ARHGEF4Q9NR80 690 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 TMPRSS4Q9NRS4 437 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 DNAJC17Q9NVM6 304 aaKnown RBP15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 RRN3Q9NYV6 651 aa15.65■□□□□ 0.1
SMPDL3A-201ENST00000368440 SIGLEC16A6NMB1 481 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 DRD1P21728 446 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 CCR1P32246 355 aa15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 EIF4A3P38919 411 aaKnown RBP15.64■□□□□ 0.09
SMPDL3A-201ENST00000368440 RPL7AP62424 266 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms