RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 MFSD1Q9H3U5 465 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 OSGEPQ9NPF4 335 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 SLC12A6Q9UHW9 1150 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 CA14Q9ULX7 337 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 TLR6Q9Y2C9 796 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
EFNA1-201ENST00000368406 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
EFNA1-201ENST00000368406 A0A0A6YYK5 440 aaPredicted RBP13.15□□□□□ -0.3
EFNA1-201ENST00000368406 IRAK2O43187 625 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 BUB1O43683 1085 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
EFNA1-201ENST00000368406 SLC2A3P11169 496 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 CCR1P32246 355 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 PITX1P78337 314 aaPredicted RBP13.15□□□□□ -0.3
EFNA1-201ENST00000368406 NNTQ13423 1086 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 PIGHQ14442 188 aaPredicted RBP13.15□□□□□ -0.3
EFNA1-201ENST00000368406 ZNF77Q15935 545 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
EFNA1-201ENST00000368406 TRNP1Q6NT89 227 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 C1orf228Q6PIY5 440 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 UNC45BQ8IWX7 931 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 SUGP1Q8IWZ8 645 aaKnown RBP13.15□□□□□ -0.3
EFNA1-201ENST00000368406 MSANTD3Q96H12 275 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 DCLK3Q9C098 648 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 LZTFL1Q9NQ48 299 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 GKN1Q9NS71 199 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 F5P12259 2224 aa13.15□□□□□ -0.3
EFNA1-201ENST00000368406 RCCD1A6NED2 376 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 SCAMP3O14828 347 aaKnown RBP13.14□□□□□ -0.31
EFNA1-201ENST00000368406 TFE3P19532 575 aaPredicted RBP13.14□□□□□ -0.31
EFNA1-201ENST00000368406 CORO1AP31146 461 aaKnown RBP13.14□□□□□ -0.31
EFNA1-201ENST00000368406 GJC1P36383 396 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 ZXDBP98169 803 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 OGDHQ02218 1023 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 USP4Q13107 963 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 PDGFRLQ15198 375 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 ARL13BQ3SXY8 428 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 ZC3H12AQ5D1E8 599 aaKnown RBP13.14□□□□□ -0.31
EFNA1-201ENST00000368406 ZFYVE27Q5T4F4 411 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 FAM131BQ86XD5 332 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 ATP6V0D2Q8N8Y2 350 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 RIN3Q8TB24 985 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 CSGALNACT1Q8TDX6 532 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 OSCP1Q8WVF1 389 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 CALR3Q96L12 384 aaKnown RBP13.14□□□□□ -0.31
EFNA1-201ENST00000368406 NELL2Q99435 816 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 KLF16Q9BXK1 252 aaPredicted RBP13.14□□□□□ -0.31
EFNA1-201ENST00000368406 LACRTQ9GZZ8 138 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 WDCPQ9H6R7 721 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 TBC1D17Q9HA65 648 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 HEBP1Q9NRV9 189 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 PIGVQ9NUD9 493 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 TMEM51Q9NW97 253 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 TRIM10Q9UDY6 481 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
EFNA1-201ENST00000368406 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
EFNA1-201ENST00000368406 BTNL10A8MVZ5 291 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 MAN2B1O00754 1011 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 PJA2O43164 708 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 SPOPO43791 374 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 PRPSAP2O60256 369 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 STC2O76061 302 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 AVPR2P30518 371 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ARHGAP25P42331 645 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 IFNAR2P48551 515 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 SLC11A2P49281 568 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 NUBP1P53384 320 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ITPRIPL2Q3MIP1 535 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 IER5LQ5T953 404 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 SH3PXD2AQ5TCZ1 1133 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 DAAM2Q86T65 1068 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 DENND1CQ8IV53 801 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ZFYVE19Q96K21 471 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ZFRQ96KR1 1074 aaKnown RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ALS2CR12Q96Q35 445 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 NCAPGQ9BPX3 1015 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 OSBPL6Q9BZF3 934 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 C8orf33Q9H7E9 229 aaPredicted RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 MRPS17Q9Y2R5 130 aaKnown RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 DUSP10Q9Y6W6 482 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 A0A0U1RQJ8 604 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 KANSL1LA0AUZ9 987 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 STK25O00506 426 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 SLC9A3R1O14745 358 aaPredicted RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 MTA2O94776 668 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 PROSCO94903 275 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 MOCS3O95396 460 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 IGLV3-25P01717 112 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 TNNT1P13805 278 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 AOC1P19801 751 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 RING1Q06587 406 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms