RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 LRRC43Q8N309 656 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 ZNF540Q8NDQ6 660 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 DNERQ8NFT8 737 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 OR2I1PQ8NGU4 316 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 RASSF8Q8NHQ8 419 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 GRAPLQ8TC17 118 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 ADAMTS18Q8TE60 1221 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 C1GALT1C1Q96EU7 318 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 DYDC2Q96IM9 177 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 HIST1H2AHQ96KK5 128 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC114Q96M63 670 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC138Q96M89 665 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 FAM193BQ96PV7 902 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 LRRC37BQ96QE4 947 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 HIST1H2AJQ99878 128 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 SDF4Q9BRK5 362 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 PI4K2AQ9BTU6 479 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 NACA2Q9H009 215 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 DEFB129Q9H1M3 183 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 GRPEL1Q9HAV7 217 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 TRPV4Q9HBA0 871 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 NSMCE4AQ9NXX6 385 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 ZHX1Q9UKY1 873 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 LRCH1Q9Y2L9 728 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 NR2E1Q9Y466 385 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 FRMPD3Q5JV73 1810 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 NCANO14594 1321 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 AOX1Q06278 1338 aa5.45□□□□□ -1.54
ECHDC1-204ENST00000368292 C2orf78A6NCI8 922 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC69A6NI79 296 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 PATE3B3GLJ2 98 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 H3BML4 177 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 K7ESM1 405 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 AHCYL1O43865 530 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 TUSC2O75896 110 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 STAMBPO95630 424 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 GSPT1P15170 499 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 CAPN2P17655 700 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 RHCEP18577 417 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 RDXP35241 583 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 USP8P40818 1118 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 FLT3LGP49771 235 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 SLC12A2P55011 1212 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 RRP1P56182 461 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 RAC3P60763 192 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 RHDQ02161 417 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC173Q0VFZ6 552 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 PGS1Q32NB8 556 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC152Q4G0S7 254 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 PACS1Q6VY07 963 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 CCDC186Q7Z3E2 898 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 ZER1Q7Z7L7 766 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 OR52K2Q8NGK3 314 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 OR14K1Q8NGZ2 314 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 TBC1D16Q8TBP0 767 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 UTP15Q8TED0 518 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 CENPIQ92674 756 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 WWC2-AS2Q96NR7 200 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 SAMD11Q96NU1 681 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 NT5C1BQ96P26 610 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 DPYSL5Q9BPU6 564 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 GPATCH1Q9BRR8 931 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 UTP14AQ9BVJ6 771 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 WDR12Q9GZL7 423 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 GREM2Q9H772 168 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 VPS37BQ9H9H4 285 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 TCP11L1Q9NUJ3 509 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 POLR3BQ9NW08 1133 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 PSD3Q9NYI0 1048 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 IFT80Q9P2H3 777 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 DNAI1Q9UI46 699 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 PLXNA1Q9UIW2 1896 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 BARX2Q9UMQ3 279 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 OAZ3Q9UMX2 235 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 TMEM98Q9Y2Y6 226 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 AK9Q5TCS8 1911 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 MAP3K15Q6ZN16 1313 aa5.44□□□□□ -1.54
ECHDC1-204ENST00000368292 ERVV-1B6SEH8 477 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 TPP1O14773 563 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 FOXS1O43638 330 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 ZBTB14O43829 449 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 HRGP04196 525 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 ALDH2P05091 517 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 HNRNPLP14866 589 aaKnown RBP eCLIP5.43□□□□□ -1.541e-9■□□□□ 8.8
ECHDC1-204ENST00000368292 GNAT2P19087 354 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 CR2P20023 1033 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 ITGB8P26012 769 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 GNL1P36915 607 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 HADHAP40939 763 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 SKIV2L2P42285 1042 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 ADCY7P51828 1080 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 ADAM8P78325 824 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 DSC2Q02487 901 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 MGAT5Q09328 741 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 AP1B1Q10567 949 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 CDC16Q13042 620 aa5.43□□□□□ -1.54
ECHDC1-204ENST00000368292 IFIT5Q13325 482 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms