RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 RNF139Q8WU17 664 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 FAM172AQ8WUF8 416 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 GOLPH3Q9H4A6 298 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 CCSER2Q9H7U1 834 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 GDE1Q9NZC3 331 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 ZMYM5Q9UJ78 669 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 M0QYT0 321 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 ZNF197O14709 1029 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 IRAK2O43187 625 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 COCHO43405 550 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 RNF8O76064 485 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 TBX18O95935 607 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 F9P00740 461 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 IGLV3-27P01718 113 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 DCNP07585 359 aaKnown RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 MYL4P12829 197 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 DESP17661 470 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 FCARP24071 287 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 DDX6P26196 483 aaKnown RBP eCLIP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 CXCR3P49682 368 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 SLC25A11Q02978 314 aaKnown RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 RAB6CQ53S08 254 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 MEI1Q5TIA1 1274 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 LRRC38Q5VT99 294 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 CYP4V2Q6ZWL3 525 aaPredicted RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 PDZD4Q76G19 769 aaPredicted RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 SLC35F6Q8N357 371 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 PJA1Q8NG27 643 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 MRPS31Q92665 395 aaKnown RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 TCEAL4Q96EI5 215 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 SLC39A13Q96H72 371 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 HES6Q96HZ4 224 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 SERPINB11Q96P15 392 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 WDR24Q96S15 920 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 PLA2G2FQ9BZM2 168 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 FOXQ1Q9C009 403 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 RNF38Q9H0F5 515 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 RAB6CQ9H0N0 254 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 ATXN3LQ9H3M9 355 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 PIGVQ9NUD9 493 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 DNMT3LQ9UJW3 386 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 NUDT5Q9UKK9 219 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 AMFRQ9UKV5 643 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 MRPS23Q9Y3D9 190 aaKnown RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 JRKLQ9Y4A0 524 aa13.21□□□□□ -0.29
LMX1A-203ENST00000367893 NUP210Q8TEM1 1887 aaPredicted RBP13.21□□□□□ -0.29
LMX1A-203ENST00000367893 SHISA7A6NL88 538 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 FANCGO15287 622 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 ECI2O75521 394 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 TCF4P15884 667 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 CTNNA2P26232 953 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 MIPP30301 263 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 GBP1P32455 592 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 KPNA1P52294 538 aaPredicted RBP13.2□□□□□ -0.3
LMX1A-203ENST00000367893 TAS2R40P59535 323 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 GNG11P61952 73 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 SLC7A9P82251 487 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 RING1Q06587 406 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 PPP2R5DQ14738 602 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 TRIP4Q15650 581 aaPredicted RBP13.2□□□□□ -0.3
LMX1A-203ENST00000367893 CDO1Q16878 200 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 C10orf120Q5SQS8 335 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 DAB2IPQ5VWQ8 1189 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 TXNDC8Q6A555 127 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 RSRC2Q7L4I2 434 aaKnown RBP13.2□□□□□ -0.3
LMX1A-203ENST00000367893 PEX26Q7Z412 305 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 POLNQ7Z5Q5 900 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 NTAN1Q96AB6 310 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 ZFRQ96KR1 1074 aaKnown RBP13.2□□□□□ -0.3
LMX1A-203ENST00000367893 GCNAQ96QF7 691 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 TASP1Q9H6P5 420 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 SFMBT1Q9UHJ3 866 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 HBS1LQ9Y450 684 aaKnown RBP13.2□□□□□ -0.3
LMX1A-203ENST00000367893 HYOU1Q9Y4L1 999 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 GVINP1Q7Z2Y8 2422 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 COL4A3Q01955 1670 aa13.2□□□□□ -0.3
LMX1A-203ENST00000367893 RIF1Q5UIP0 2472 aaKnown RBP13.2□□□□□ -0.3
LMX1A-203ENST00000367893 FRYLO94915 3013 aa13.19□□□□□ -0.3
LMX1A-203ENST00000367893 MIF4GDA9UHW6 222 aaKnown RBP13.19□□□□□ -0.3
LMX1A-203ENST00000367893 KIF2AO00139 706 aaPredicted RBP13.19□□□□□ -0.3
LMX1A-203ENST00000367893 STK25O00506 426 aa13.19□□□□□ -0.3
LMX1A-203ENST00000367893 MDM4O15151 490 aa13.19□□□□□ -0.3
LMX1A-203ENST00000367893 PSTPIP1O43586 416 aa13.19□□□□□ -0.3
LMX1A-203ENST00000367893 SPOPO43791 374 aa13.19□□□□□ -0.3
LMX1A-203ENST00000367893 FTCDO95954 541 aa13.19□□□□□ -0.3
LMX1A-203ENST00000367893 GJA1P17302 382 aa13.19□□□□□ -0.3
LMX1A-203ENST00000367893 IL1R2P27930 398 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms