RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 C1orf220Q5T0J3 134 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 GRAMD1CQ8IYS0 662 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 DDI1Q8WTU0 396 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 CYB5D2Q8WUJ1 264 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 TAF4BQ92750 862 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 IGSF8Q969P0 613 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 BIRC7Q96CA5 298 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 CDK5RAP1Q96SZ6 601 aaKnown RBP11.98□□□□□ -0.49
MRPL55-212ENST00000366739 NT5C1AQ9BXI3 368 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 DUSP16Q9BY84 665 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 ZSCAN16Q9H4T2 348 aaPredicted RBP11.98□□□□□ -0.49
MRPL55-212ENST00000366739 APOBEC3GQ9HC16 384 aaKnown RBP11.98□□□□□ -0.49
MRPL55-212ENST00000366739 MARCH2Q9P0N8 246 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 USP3Q9Y6I4 520 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 GOLGA4Q13439 2230 aaKnown RBP11.98□□□□□ -0.49
MRPL55-212ENST00000366739 NUMA1Q14980 2115 aa11.98□□□□□ -0.49
MRPL55-212ENST00000366739 PVALEFA0A1B0GWK0 134 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 SLC12A8A0AV02 714 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 PLK4O00444 970 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 PCDHGA12O60330 932 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 CUTAO60888 179 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 PPP6R2O75170 966 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 FSBPO95073 299 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 SEMA4FO95754 770 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 CD58P19256 250 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 CTSKP43235 329 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 ABCG1P45844 678 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 CLDN6P56747 220 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 STK4Q13043 487 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 E2F5Q15329 346 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 FNDC3BQ53EP0 1204 aaKnown RBP11.97□□□□□ -0.49
MRPL55-212ENST00000366739 PPP1R26Q5T8A7 1209 aaPredicted RBP11.97□□□□□ -0.49
MRPL55-212ENST00000366739 SLC9A9Q8IVB4 645 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 CPXM2Q8N436 756 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 KIAA0895Q8NCT3 520 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 PIP4K2CQ8TBX8 421 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 TMC2Q8TDI7 906 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 COL26A1Q96A83 441 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 BACH2Q9BYV9 841 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 SLC2A11Q9BYW1 496 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 TMEM245Q9H330 911 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 MAGEF1Q9HAY2 307 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 OSGEPQ9NPF4 335 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 FTSJ1Q9UET6 329 aa11.97□□□□□ -0.49
MRPL55-212ENST00000366739 CABIN1Q9Y6J0 2220 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 TIMM44O43615 452 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 TSPAN3O60637 253 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 C1QL1O75973 258 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 NR3C1P04150 777 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 CD27P26842 260 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 ITPKBP27987 946 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 HOXD9P28356 352 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-212ENST00000366739 HLA-FP30511 346 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 RPS14P62263 151 aaKnown RBP11.96□□□□□ -0.49
MRPL55-212ENST00000366739 CEP135Q66GS9 1140 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 RSRC2Q7L4I2 434 aaKnown RBP11.96□□□□□ -0.49
MRPL55-212ENST00000366739 FAM217AQ8IXS0 508 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 TAS1R2Q8TE23 839 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 UBL7Q96S82 380 aaPredicted RBP11.96□□□□□ -0.49
MRPL55-212ENST00000366739 ARID3AQ99856 593 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 ORAI3Q9BRQ5 295 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 NIF3L1Q9GZT8 377 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 BTBD1Q9H0C5 482 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 CYP3A43Q9HB55 503 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 PRSS16Q9NQE7 514 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 STRIP2Q9ULQ0 834 aa11.96□□□□□ -0.49
MRPL55-212ENST00000366739 ASH1LQ9NR48 2969 aaKnown RBP11.96□□□□□ -0.5
MRPL55-212ENST00000366739 TMEM131Q92545 1883 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 KALRNO60229 2985 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 CBX4O00257 560 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 IKBKBO14920 756 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 KLRC4O43908 158 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 TRIM49P0CI25 452 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 TRIM49CP0CI26 452 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 C7P10643 843 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 GCLMP48507 274 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 YWHAGP61981 247 aaKnown RBP eCLIP11.95□□□□□ -0.5
MRPL55-212ENST00000366739 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 TRIP4Q15650 581 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-212ENST00000366739 MPPE1Q53F39 396 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 ZNF394Q53GI3 561 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 PRAMEF14Q5SWL7 426 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 CHST9Q7L1S5 443 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 ADAT2Q7Z6V5 191 aaKnown RBP11.95□□□□□ -0.5
MRPL55-212ENST00000366739 ADIPOR2Q86V24 386 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 TMPRSS12Q86WS5 348 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 GATAD2AQ86YP4 633 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 ZC3H3Q8IXZ2 948 aaKnown RBP11.95□□□□□ -0.5
MRPL55-212ENST00000366739 ENGASEQ8NFI3 743 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 TMEM174Q8WUU8 243 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 NDRG1Q92597 394 aaKnown RBP11.95□□□□□ -0.5
MRPL55-212ENST00000366739 PLD4Q96BZ4 506 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 IMPG2Q9BZV3 1241 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 ABCB8Q9NUT2 735 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 PLA2G4CQ9UP65 541 aa11.95□□□□□ -0.5
MRPL55-212ENST00000366739 MUC22E2RYF6 1773 aaPredicted RBP11.95□□□□□ -0.5
MRPL55-212ENST00000366739 A0A1B0GTQ1 180 aa11.94□□□□□ -0.5
MRPL55-212ENST00000366739 E9PAM4 449 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms