RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ST6GALNAC4Q9H4F1 302 aa8.96□□□□□ -0.98
HMGB1P39-201ENST00000366304 RBAKQ9NYW8 714 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P39-201ENST00000366304 WDR35Q9P2L0 1181 aa8.96□□□□□ -0.98
HMGB1P39-201ENST00000366304 NUDT5Q9UKK9 219 aa8.96□□□□□ -0.98
HMGB1P39-201ENST00000366304 SLC27A6Q9Y2P4 619 aa8.96□□□□□ -0.98
HMGB1P39-201ENST00000366304 VWA3AA6NCI4 1184 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 VILLO15195 856 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 SYNCRIPO60506 623 aaKnown RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 TLR5O60602 858 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 SEMA4FO95754 770 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 CST3P01034 146 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 JUNDP17535 347 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 SCP2P22307 547 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 GNL1P36915 607 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 RPIAP49247 311 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 TUBP50607 506 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 GRIN1Q05586 938 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 ORC1Q13415 861 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 CAMK2GQ13555 558 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 ANKRD1Q15327 319 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 MAPRE1Q15691 268 aaKnown RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 CENPQQ7L2Z9 268 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 GPRIN1Q7Z2K8 1008 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 ZC3H3Q8IXZ2 948 aaKnown RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 ZNF248Q8NDW4 579 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 PDZD8Q8NEN9 1154 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 ELMO3Q96BJ8 720 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 ELF4Q99607 663 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 ELOVL4Q9GZR5 314 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 LHX5Q9H2C1 402 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 PCIF1Q9H4Z3 704 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 NMUR1Q9HB89 426 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 INTS13Q9NVM9 706 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 EHD2Q9NZN4 543 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 NXF1Q9UBU9 619 aaKnown RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 SERGEFQ9UGK8 458 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 NOL7Q9UMY1 257 aaKnown RBP8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 CLCA2Q9UQC9 943 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 CKAP5Q14008 2032 aa8.95□□□□□ -0.98
HMGB1P39-201ENST00000366304 A0A1W2PR77 199 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 PMS2P1A4D2B8 440 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 LAD1O00515 517 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 KLK10O43240 276 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 RTN3O95197 1032 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 EPHX1P07099 455 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 ACADMP11310 421 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 EPHA8P29322 1005 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 CDH8P55286 799 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 PCBP4P57723 403 aaKnown RBP8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 RPS14P62263 151 aaKnown RBP8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 VAC14Q08AM6 782 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 NFATC3Q12968 1075 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 KCNJ12Q14500 433 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 SFMBT2Q5VUG0 894 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 KDM7AQ6ZMT4 941 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 FAM35AQ86V20 835 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 CCDC83Q8IWF9 413 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 DHX40Q8IX18 779 aaKnown RBP8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 B3GALNT2Q8NCR0 500 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 ENGASEQ8NFI3 743 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 OR6B3Q8NGW1 331 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 OR2T3Q8NH03 318 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 CACTINQ8WUQ7 758 aaKnown RBP8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 RAD54LQ92698 747 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 MMS19Q96T76 1030 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 SMOQ99835 787 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 GZF1Q9H116 711 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 MTG2Q9H4K7 406 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 ASCL3Q9NQ33 180 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 ELOVL2Q9NXB9 296 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 TBC1D7Q9P0N9 293 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 ANKMY1Q9P2S6 941 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 PLXNA2O75051 1894 aa8.94□□□□□ -0.98
HMGB1P39-201ENST00000366304 TRIM38O00635 465 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 CYP26A1O43174 497 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 EFSO43281 561 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 TACC1O75410 805 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 STC2O76061 302 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 CD2BP2O95400 341 aaKnown RBP8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 MT-CO3P00414 261 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 ITGAVP06756 1048 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 TMEM191BP0C7N4 346 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 ZNF132P52740 706 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 POSTNQ15063 836 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 INAVAQ3KP66 663 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 LINC00303Q3SY05 128 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 SPATS2Q86XZ4 545 aaKnown RBP8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 CBWD2Q8IUF1 395 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 FUKQ8N0W3 1084 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 CACTIN-AS1Q8N1I8 211 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 KCTD17Q8N5Z5 321 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 CYB5D2Q8WUJ1 264 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 CDK5RAP3Q96JB5 506 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 TMEM245Q9H330 911 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 SNX25Q9H3E2 840 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 BSNQ9UPA5 3926 aa8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 ARID1BQ8NFD5 2236 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P39-201ENST00000366304 A0A1W2PPC4 97 aa8.92□□□□□ -0.98
HMGB1P39-201ENST00000366304 HHLA1C9JL84 531 aa8.92□□□□□ -0.98
HMGB1P39-201ENST00000366304 K7ENP7 123 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms