RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 ANKRD7Q92527 254 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 HAS1Q92839 578 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 TMEM159Q96B96 161 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 PCDHA3Q9Y5H8 950 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 SPTLC1O15269 473 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 DYRK3O43781 588 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 TPST1O60507 370 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 USP17L7P0C7H9 530 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 NOS2P35228 1153 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 ATP5C1P36542 298 aaKnown RBP10.58□□□□□ -0.72
ZNF548-202ENST00000366197 MLH1P40692 756 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 PPP3CAQ08209 521 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 ICE2Q659A1 982 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 KCNT2Q6UVM3 1135 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 SLC44A2Q8IWA5 706 aaPredicted RBP10.58□□□□□ -0.72
ZNF548-202ENST00000366197 GALNT4Q8N4A0 578 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 CYGBQ8WWM9 190 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 RMND5AQ9H871 391 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 ABCC13Q9NSE7 274 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 L1RE1Q9UN81 338 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 V9GYQ6 96 aa10.58□□□□□ -0.72
ZNF548-202ENST00000366197 GNG14A0A1W2PPG7 69 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 EIF4E1BA6NMX2 242 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TISP43B9A030 160 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 KPNA3O00505 521 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 PYGMP11217 842 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 ELK3P41970 407 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 RFX3P48380 749 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 SERPINB10P48595 397 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 ST3GAL1Q11201 340 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 ITGA9Q13797 1035 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 PLPPR4Q7Z2D5 763 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 GPR142Q7Z601 462 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 KRT78Q8N1N4 520 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 APBB2Q92870 758 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 HSFY1Q96LI6 401 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 ZNF558Q96NG5 402 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TSEN34Q9BSV6 310 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 YIPF3Q9GZM5 350 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TKTL2Q9H0I9 626 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 SEMA4AQ9H3S1 761 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 CTNNAL1Q9UBT7 734 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 NUDT5Q9UKK9 219 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 CYP3A7-CYP3A51PA0A087WV96 503 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 SMIM22K7EJ46 135 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TRIM66O15016 1216 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 MAFO75444 373 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 IGSF6O95976 241 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 MSH3P20585 1137 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 CYP3A7P24462 503 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 NPY2RP49146 381 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 WSCD1Q658N2 575 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 WNT8BQ93098 351 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 SEPT3Q9UH03 358 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 PCDHAC2Q9Y5I4 1007 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 CAMTA1Q9Y6Y1 1673 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 DNALI1O14645 258 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 KRT6AP02538 564 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 APOA1P02647 267 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 KRT6BP04259 564 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 ATP5BP06576 529 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 DARSP14868 501 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 KRT6CP48668 564 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 POLR2LP62875 67 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 ILF2Q12905 390 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 BMPR2Q13873 1038 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TRMT11Q7Z4G4 463 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 THAP11Q96EK4 314 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 MRPL17Q9NRX2 175 aaKnown RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 SCN3BQ9NY72 215 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 UBA2Q9UBT2 640 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-202ENST00000366197 HES2Q9Y543 173 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 DEPDC5O75140 1603 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 LRRC10BA6NIK2 292 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 RNF103O00237 685 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 CCDC130P13994 396 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 BCL2L1Q07817 233 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TGM3Q08188 693 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 SRLQ86TD4 932 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 SLC22A9Q8IVM8 553 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TMEM161BQ8NDZ6 487 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 BTN2A2Q8WVV5 523 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 TAS2R13Q9NYV9 303 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 FAM153AQ9UHL3 310 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 DNAJC16Q9Y2G8 782 aa10.57□□□□□ -0.72
ZNF548-202ENST00000366197 APOC4-APOC2K7ER74 178 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 VAPBO95292 243 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 APOC2P02655 101 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 GLI1P08151 1106 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 SMIM10L2AP0DMW4 78 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 SMIM10L2BP0DMW5 78 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 ITGB5P18084 799 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 TFE3P19532 575 aaPredicted RBP10.56□□□□□ -0.72
ZNF548-202ENST00000366197 LRRC23Q53EV4 343 aaPredicted RBP10.56□□□□□ -0.72
ZNF548-202ENST00000366197 SH3RF1Q7Z6J0 888 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 TRPM4Q8TD43 1214 aa10.56□□□□□ -0.72
ZNF548-202ENST00000366197 FTHL17Q9BXU8 183 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms