RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 TRIM36Q9NQ86 728 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SLC35C2Q9NQQ7 365 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MPP6Q9NZW5 540 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NKX1-2Q9UD57 310 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 LIMA1Q9UHB6 759 aaKnown RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CD207Q9UJ71 328 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 OSGIN2Q9Y236 505 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZDHHC9Q9Y397 364 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KCNE2Q9Y6J6 123 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PMF1-BGLAPU3KQ54 211 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TEX51A0A1B0GUA7 166 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 A0A1W2PRX2 142 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C9orf118A6NHY6 69 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 LIPT2A6NK58 231 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM90A7PA6NKC0 464 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C16orf96A6NNT2 1141 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM90A22PA8MWA6 464 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM90A12PA8MX19 464 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM90A23PA8MXZ1 464 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 AGPSO00116 658 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 BCAT2O15382 392 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NKX2-8O15522 239 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TGFB1I1O43294 461 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 WNT11O96014 354 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TUBB4AP04350 444 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 EIF2S1P05198 315 aaKnown RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PTMAP06454 111 aaKnown RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CSF1RP07333 972 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ACP5P13686 325 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MMP8P22894 467 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GCH1P30793 250 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PPARGP37231 505 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PBX1P40424 430 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CLK1P49759 484 aaKnown RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MMP14P50281 582 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RCAN1P53805 252 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 UFM1P61960 85 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TFCP2Q12800 502 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SEMA3BQ13214 749 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RIN1Q13671 783 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KCNJ12Q14500 433 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KYNUQ16719 465 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM214AQ32MH5 1076 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GARNL3Q5VVW2 1013 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ANKRD40Q6AI12 368 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TMEM132EQ6IEE7 984 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RGS7BPQ6MZT1 257 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TMEM154Q6P9G4 183 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NCEH1Q6PIU2 408 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM111BQ6SJ93 734 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TMPRSS9Q7Z410 1059 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RALYLQ86SE5 291 aaKnown RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RAB11FIP4Q86YS3 637 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ABRAQ8N0Z2 381 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CNTROBQ8N137 903 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 OR8H3Q8N146 312 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 WDTC1Q8N5D0 677 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FRMD1Q8N878 549 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ARL10Q8N8L6 244 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 POMGNT2Q8NAT1 580 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RNF169Q8NCN4 708 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SHCBP1Q8NEM2 672 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ST8SIA2Q92186 375 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MARS2Q96GW9 593 aaKnown RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 LRIG1Q96JA1 1093 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HAPLN3Q96S86 360 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NPAS1Q99742 590 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SPATA25Q9BR10 227 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CPPED1Q9BRF8 314 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HERC2P3Q9BVR0 1158 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TEX12Q9BXU0 123 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MROH8Q9H579 483 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 DBNDD1Q9H9R9 158 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PDE11AQ9HCR9 933 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 XAB2Q9HCS7 855 aaKnown RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PDE7BQ9NP56 450 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PCDHB16Q9NRJ7 776 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CTTNBP2NLQ9P2B4 639 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RASAL2Q9UJF2 1139 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GTF3C4Q9UKN8 822 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TRPC5Q9UL62 973 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RIMKLBQ9ULI2 386 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ISY1Q9ULR0 285 aaKnown RBP4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RCE1Q9Y256 329 aa4.01□□□□□ -1.77
RNU6-1249P-201ENST00000363237 A0A1W2PQ09 198 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GTPBP10A4D1E9 387 aaKnown RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 AGAP5A6NIR3 686 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PI4K2BG5E9Z4 385 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GCOM1H8Y6P7 765 aaPredicted RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TRIAP1O43715 76 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 AFPP02771 609 aaKnown RBP4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CFIP05156 583 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CYP3A4P08684 503 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TMEM225BP0DP42 221 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KCNA2P16389 499 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 GNAT2P19087 354 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SAT1P21673 171 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 DRD1P21728 446 aa4□□□□□ -1.77
RNU6-1249P-201ENST00000363237 YY1P25490 414 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms