RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 KCNV2Q8TDN2 545 aa17.59■□□□□ 0.41
CKLF-204ENST00000362093 IRX2Q9BZI1 471 aaPredicted RBP17.59■□□□□ 0.41
CKLF-204ENST00000362093 SEMA4AQ9H3S1 761 aa17.59■□□□□ 0.41
CKLF-204ENST00000362093 HCN2Q9UL51 889 aa17.59■□□□□ 0.41
CKLF-204ENST00000362093 SLC8A2Q9UPR5 921 aa17.59■□□□□ 0.41
CKLF-204ENST00000362093 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
CKLF-204ENST00000362093 GOLGA6L7A0A1B0GV03 622 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 GOLGA6L19H0YKK7 550 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 TSPAN3O60637 253 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 SLC6A4P31645 630 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 NOS2P35228 1153 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 TIE1P35590 1138 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 MRE11P49959 708 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 CDK17Q00537 523 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 ARID5AQ03989 594 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 DMC1Q14565 340 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 C2CD6Q53TS8 623 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 FAM133BQ5BKY9 247 aaKnown RBP17.58■□□□□ 0.4
CKLF-204ENST00000362093 ZC3H12AQ5D1E8 599 aaKnown RBP17.58■□□□□ 0.4
CKLF-204ENST00000362093 NADSYN1Q6IA69 706 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 IL17RCQ8NAC3 791 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 DDI1Q8WTU0 396 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 ATRIPQ8WXE1 791 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 ACDQ96AP0 544 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 TMA16Q96EY4 203 aaKnown RBP17.58■□□□□ 0.4
CKLF-204ENST00000362093 SLC2A11Q9BYW1 496 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 CLEC4EQ9ULY5 219 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 SLC27A6Q9Y2P4 619 aa17.58■□□□□ 0.4
CKLF-204ENST00000362093 FAM170AA1A519 330 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 PRRT4C9JH25 899 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 DAB1O75553 588 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 FERP16591 822 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 MMP8P22894 467 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 HOXD9P28356 352 aaPredicted RBP17.57■□□□□ 0.4
CKLF-204ENST00000362093 GBP1P32455 592 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 PBX1P40424 430 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 MATKP42679 507 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 FNTBP49356 437 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 UBASH3AP57075 661 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 MPP7Q5T2T1 576 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 PIK3R6Q5UE93 754 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 ALYREFQ86V81 257 aaKnown RBP17.57■□□□□ 0.4
CKLF-204ENST00000362093 CCDC33Q8N5R6 958 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 CAMKK1Q8N5S9 505 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 MSANTD4Q8NCY6 345 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 SLC30A5Q8TAD4 765 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 NKD2Q969F2 451 aaPredicted RBP17.57■□□□□ 0.4
CKLF-204ENST00000362093 NT5C3BQ969T7 300 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 NPY6RQ99463 290 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 AGPAT1Q99943 283 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 EDEM3Q9BZQ6 932 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 TTYH3Q9C0H2 523 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.57■□□□□ 0.4
CKLF-204ENST00000362093 XPO7Q9UIA9 1087 aaKnown RBP17.57■□□□□ 0.4
CKLF-204ENST00000362093 TMEM59LQ9UK28 342 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 MMP17Q9ULZ9 603 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 FANCMQ8IYD8 2048 aa17.57■□□□□ 0.4
CKLF-204ENST00000362093 KIAA1549LQ6ZVL6 1849 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 KCNU1A8MYU2 1149 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 KLF8O95600 359 aaPredicted RBP17.56■□□□□ 0.4
CKLF-204ENST00000362093 CCDC172P0C7W6 258 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 SGSHP51688 502 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 RNASE9P60153 205 aaKnown RBP17.56■□□□□ 0.4
CKLF-204ENST00000362093 PTP4A2Q12974 167 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 CLEC16AQ2KHT3 1053 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 FIGNQ5HY92 759 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 C10orf76Q5T2E6 689 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 RNF43Q68DV7 783 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 RFWD3Q6PCD5 774 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 LRSAM1Q6UWE0 723 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 ARCQ7LC44 396 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 WDR5BQ86VZ2 330 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 LONP2Q86WA8 852 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 ALLCQ8N6M5 410 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 TXNDC5Q8NBS9 432 aaKnown RBP17.56■□□□□ 0.4
CKLF-204ENST00000362093 DDX50Q9BQ39 737 aaKnown RBP17.56■□□□□ 0.4
CKLF-204ENST00000362093 SYT11Q9BT88 431 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 DDIT4Q9NX09 232 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 RRN3Q9NYV6 651 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.56■□□□□ 0.4
CKLF-204ENST00000362093 AIPL1Q9NZN9 384 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 CALCOCO1Q9P1Z2 691 aa17.56■□□□□ 0.4
CKLF-204ENST00000362093 CCDC163A0A0D9SF12 145 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 LRRC53A6NM62 1247 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 M0QYT0 321 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 ADAM23O75077 832 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 SLC2A3P11169 496 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 TFE3P19532 575 aaPredicted RBP17.55■□□□□ 0.4
CKLF-204ENST00000362093 CENPCQ03188 943 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 CRY1Q16526 586 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 GEN1Q17RS7 908 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 FAM102AQ5T9C2 384 aaPredicted RBP17.55■□□□□ 0.4
CKLF-204ENST00000362093 OTUD1Q5VV17 481 aaPredicted RBP17.55■□□□□ 0.4
CKLF-204ENST00000362093 HEATR6Q6AI08 1181 aaKnown RBP17.55■□□□□ 0.4
CKLF-204ENST00000362093 MMS22LQ6ZRQ5 1243 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 ASCL5Q7RTU5 278 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 PHF13Q86YI8 300 aaPredicted RBP17.55■□□□□ 0.4
CKLF-204ENST00000362093 ZNF513Q8N8E2 541 aaPredicted RBP17.55■□□□□ 0.4
CKLF-204ENST00000362093 SUMF1Q8NBK3 374 aa17.55■□□□□ 0.4
CKLF-204ENST00000362093 MYEOVQ96EZ4 313 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms