RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 UBN1Q9NPG3 1134 aa2.97□□□□□ -1.93
LTN1-201ENST00000361371 CNGB3Q9NQW8 809 aa2.97□□□□□ -1.93
LTN1-201ENST00000361371 PCYOX1Q9UHG3 505 aa2.97□□□□□ -1.93
LTN1-201ENST00000361371 ACSL3O95573 720 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 EPCAMP16422 314 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TPH1P17752 444 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 OAS2P29728 719 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 ACVRL1P37023 503 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 CHRNA4P43681 627 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 MPP2Q14168 576 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SLC29A2Q14542 456 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 PPP1R7Q15435 360 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 HADHQ16836 314 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 ERMARDQ5T6L9 678 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 BTBD8Q5XKL5 378 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 NADSYN1Q6IA69 706 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 GAREM2Q75VX8 874 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 PRPF39Q86UA1 669 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 RNF135Q8IUD6 432 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 DCP1BQ8IZD4 617 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 LRRC43Q8N309 656 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 PDCD7Q8N8D1 485 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 ARL14EPQ8N8R7 260 aaPredicted RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 ATL2Q8NHH9 583 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ART4Q93070 314 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 AGAP3Q96P47 875 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 YME1L1Q96TA2 773 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TXLNGYQ9BZA5 131 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 MTG2Q9H4K7 406 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SMYD2Q9NRG4 433 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 MTRRQ9UBK8 725 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 HS3ST4Q9Y661 456 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 J3KR12 359 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 CES2O00748 559 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 FGF18O76093 207 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 IGLV3-25P01717 112 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SP100P23497 879 aaPredicted RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 SSTR1P30872 391 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SLC6A4P31645 630 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 HSPA9P38646 679 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 GPS1Q13098 491 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 DPYSL2Q16555 572 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 BBS9Q3SYG4 887 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TFDP3Q5H9I0 405 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 FNBP1LQ5T0N5 605 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 FAM219BQ5XKK7 198 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 FBXL22Q6P050 247 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ZNF534Q76KX8 674 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 GSTA5Q7RTV2 222 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TMC3Q7Z5M5 1100 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TXLNBQ8N3L3 684 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 COLGALT1Q8NBJ5 622 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 CCNYQ8ND76 341 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SPATA22Q8NHS9 363 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ZNF461Q8TAF7 563 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 WFDC5Q8TCV5 224 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ADAMTS19Q8TE59 1207 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 EPS8L3Q8TE67 593 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 NAT14Q8WUY8 206 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 RNF34Q969K3 372 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SLC39A13Q96H72 371 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TMEM169Q96HH4 297 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ZNF558Q96NG5 402 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 FAM204AQ9H8W3 233 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 NINJ2Q9NZG7 142 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 KANSL3Q9P2N6 904 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 FBXW11Q9UKB1 542 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 A0A0C4DFX4 3053 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 CLUHO75153 1309 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SF3B1O75533 1304 aaKnown RBP eCLIP2.96□□□□□ -1.945e-6■■■■■ 58.5
LTN1-201ENST00000361371 CCL22O00626 93 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TLR5O60602 858 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 LILRB3O75022 631 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 PAGE1O75459 146 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 IRF1P10914 325 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ATF2P15336 505 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 GLUD2P49448 558 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 MAXP61244 160 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 WASHC5Q12768 1159 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ZBTB17Q13105 803 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 PLD1Q13393 1074 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 EFTUD2Q15029 972 aaKnown RBP eCLIP2.96□□□□□ -1.944e-8■□□□□ 8.3
LTN1-201ENST00000361371 RNASEH2BQ5TBB1 312 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 SLC9A4Q6AI14 798 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 HERC6Q8IVU3 1022 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 MPP5Q8N3R9 675 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ALLCQ8N6M5 410 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SPPL3Q8TCT6 385 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 DPF3Q92784 378 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 RPGRIP1Q96KN7 1286 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 IL23AQ9NPF7 189 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 PLAAQ9Y263 795 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 ABHD14A-ACY1A0A1B0GW23 586 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SLC38A8A6NNN8 435 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 APOC4-APOC2K7ER74 178 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 SGK1O00141 431 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 TGM5O43548 720 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 BUD23O43709 281 aaKnown RBP2.96□□□□□ -1.94
LTN1-201ENST00000361371 JCHAINP01591 159 aa2.96□□□□□ -1.94
LTN1-201ENST00000361371 APOC2P02655 101 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms