RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 SRRDQ9UH36 339 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 SYNJ2BP-COX16A0A087WUM0 186 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 IQANK1A0A1B0GTG1 560 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 PPP1R12AO14974 1030 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 USP17L7P0C7H9 530 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 NCAM1P13591 858 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 GLUD2P49448 558 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 DPYSQ14117 519 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 PRKD1Q15139 912 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 RFX8Q6ZV50 586 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 GPRIN1Q7Z2K8 1008 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 ZNF598Q86UK7 904 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 IGDCC3Q8IVU1 814 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 C10orf67Q8IYJ2 551 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 GDAP1Q8TB36 358 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 DENND1AQ8TEH3 1009 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 DCAKDQ8WVC6 231 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 PPM1EQ8WY54 764 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 RSPH1Q8WYR4 309 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 SUSD3Q96L08 255 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 ELAC2Q9BQ52 826 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 DMAP1Q9NPF5 467 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 TRMT13Q9NUP7 481 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 COX16Q9P0S2 106 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 FBXW11Q9UKB1 542 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 INPP5FQ9Y2H2 1132 aa18.9■□□□□ 0.62
PDLIM7-203ENST00000359895 TCRBV9S1A1TA0A576 114 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 MOXD2PA6NHM9 499 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 ANKRD65E5RJM6 399 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 CREB3O43889 395 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 MFSD11O43934 449 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 OPHN1O60890 802 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 METTL18O95568 372 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 EOMESO95936 686 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 BRCC3P46736 316 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 TSPY1Q01534 308 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 EFTUD2Q15029 972 aaKnown RBP eCLIP18.89■□□□□ 0.629e-7■■■■■ 31.7
PDLIM7-203ENST00000359895 ANKRD20A2Q5SQ80 823 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 FAXCQ5TGI0 409 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 ANKRD20A1Q5TYW2 823 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 ANKRD20A3Q5VUR7 823 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 PM20D1Q6GTS8 502 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 OVOS1Q6IE37 1185 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 CD300LGQ6UXG3 332 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 CAND1Q86VP6 1230 aaKnown RBP18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 SLC44A1Q8WWI5 657 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 GRAMD1AQ96CP6 724 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 MRRFQ96E11 262 aaKnown RBP18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 TGS1Q96RS0 853 aaKnown RBP18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 TSEN34Q9BSV6 310 aaKnown RBP18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 ACTR5Q9H9F9 607 aaPredicted RBP18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 WDR6Q9NNW5 1121 aaKnown RBP18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 RGS18Q9NS28 235 aa18.89■□□□□ 0.62
PDLIM7-203ENST00000359895 I3L4J1 428 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 TYROBPO43914 113 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 SPAG7O75391 227 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 ZWINTO95229 277 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 ASMTLO95671 621 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 MLNP12872 115 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 CA4P22748 312 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 MAGEA3P43357 314 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 CACNA2D1P54289 1103 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 NUGGCQ68CJ6 796 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 BEND5Q7L4P6 421 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 GLT1D1Q96MS3 346 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 PKMYT1Q99640 499 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 PLCD4Q9BRC7 762 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 RASSF4Q9H2L5 321 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 KDM4CQ9H3R0 1056 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 MLXIPLQ9NP71 852 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 EIF2B3Q9NR50 452 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 TMEM30AQ9NV96 361 aa18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 ZC3H7BQ9UGR2 993 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-203ENST00000359895 DCLK1O15075 740 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 NCAM2O15394 837 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 SNX3O60493 162 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 AVILO75366 819 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 CPP00450 1065 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 INHBAP08476 426 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 VAV1P15498 845 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 WDR4P57081 412 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 TPI1P60174 286 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 CAP1Q01518 475 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 SEMA3BQ13214 749 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 GLB1LQ6UWU2 654 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 RGS9BPQ6ZS82 235 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 C4orf33Q8N1A6 199 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 MZB1Q8WU39 189 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 CFAP36Q96G28 342 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 CFHR5Q9BXR6 569 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 BRD8Q9H0E9 1235 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 DDIT4Q9NX09 232 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 WBP1LQ9NX94 342 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.88■□□□□ 0.619e-8■■■■■ 27
PDLIM7-203ENST00000359895 PCDHB8Q9UN66 801 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 MFHAS1Q9Y4C4 1052 aa18.88■□□□□ 0.61
PDLIM7-203ENST00000359895 A0A1W2PPM1 405 aa18.87■□□□□ 0.61
PDLIM7-203ENST00000359895 TRIM66O15016 1216 aa18.87■□□□□ 0.61
PDLIM7-203ENST00000359895 TRPA1O75762 1119 aa18.87■□□□□ 0.61
PDLIM7-203ENST00000359895 FSBPO95073 299 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms