RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 FAM81AQ8TBF8 368 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 APBB2Q92870 758 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 CNPY3Q9BT09 278 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PCDH18Q9HCL0 1135 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 UBAP1Q9NZ09 502 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 INPP5FQ9Y2H2 1132 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PCDHA11Q9Y5I1 949 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 COL4A5P29400 1685 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 WDR27A2RRH5 827 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 APOL1O14791 398 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 B4GALT5O43286 388 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 GJB1P08034 283 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 F7P08709 466 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 NCF2P19878 526 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 CHN2P52757 468 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 TBL3Q12788 808 aaKnown RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 CCDC14Q49A88 953 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 LRRC23Q53EV4 343 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 EEF1DP3Q658K8 133 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 SLC9A4Q6AI14 798 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 OR6B2Q6IFH4 312 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 TMC7Q7Z402 723 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 LRRC71Q8N4P6 559 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 DNAJC1Q96KC8 554 aaKnown RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 PGLYRP2Q96PD5 576 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 FRMD8Q9BZ67 464 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 ZNF277Q9NRM2 450 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 C15orf38-AP3S2A0A0A6YYH1 394 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 VILLO15195 856 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 DCXO43602 365 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 EGFRP00533 1210 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 TFAP2AP05549 437 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 PRKCBP05771 671 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 NFICP08651 508 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 CXCL8P10145 99 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 TFE3P19532 575 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 USP4Q13107 963 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 SNAPC2Q13487 334 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 GK3PQ14409 553 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 PPP6R3Q5H9R7 873 aaPredicted RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 ZNF667Q5HYK9 610 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 ARPINQ7Z6K5 226 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 FBXW8Q8N3Y1 598 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 NME8Q8N427 588 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 RNF149Q8NC42 400 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPE-202ENST00000359429 LRRC39Q96DD0 335 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 TMEM176AQ96HP8 235 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 MPP4Q96JB8 637 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 CDHR1Q96JP9 859 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 RNPEPQ9H4A4 650 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 NGRNQ9NPE2 291 aaKnown RBP11.22□□□□□ -0.61
RPE-202ENST00000359429 TMEM216Q9P0N5 145 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 HSFX1Q9UBD0 423 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
RPE-202ENST00000359429 UTRNP46939 3433 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 IGKV6D-21A0A0A0MT36 114 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 MYOCOSA0A1B0GUC4 107 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 IRF6O14896 467 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 CASQ2O14958 399 aaPredicted RBP11.21□□□□□ -0.61
RPE-202ENST00000359429 PEX10O60683 326 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 CILPO75339 1184 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 TNNC2P02585 160 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 TCF7P36402 384 aaPredicted RBP11.21□□□□□ -0.61
RPE-202ENST00000359429 RGS7P49802 495 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 SERPINB9P50453 376 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 METTL25Q8N6Q8 603 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 NETO2Q8NC67 525 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 MOCOSQ96EN8 888 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 HEXIM2Q96MH2 286 aaKnown RBP11.21□□□□□ -0.61
RPE-202ENST00000359429 SNRNP25Q9BV90 132 aaKnown RBP11.21□□□□□ -0.61
RPE-202ENST00000359429 XPNPEP3Q9NQH7 507 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 ATXN10Q9UBB4 475 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 FZD1Q9UP38 647 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 MFHAS1Q9Y4C4 1052 aa11.21□□□□□ -0.61
RPE-202ENST00000359429 SIP14410 1827 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 B4GALT4O60513 344 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 SERPINE1P05121 402 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 TGM2P21980 687 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 ATXN1P54253 815 aaKnown RBP11.21□□□□□ -0.62
RPE-202ENST00000359429 MTTPP55157 894 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 LAMTOR4Q0VGL1 99 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 ITGA9Q13797 1035 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 OGFRL1Q5TC84 451 aaPredicted RBP11.21□□□□□ -0.62
RPE-202ENST00000359429 PAOXQ6QHF9 649 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 PACS1Q6VY07 963 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 MAPK15Q8TD08 544 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 JADE3Q92613 823 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 ZBED3Q96IU2 234 aaPredicted RBP11.21□□□□□ -0.62
RPE-202ENST00000359429 ANKRD36BP1Q96IX9 119 aa11.21□□□□□ -0.62
RPE-202ENST00000359429 PRICKLE1Q96MT3 831 aaPredicted RBP11.21□□□□□ -0.62
RPE-202ENST00000359429 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms