RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 ZNF470Q6ECI4 717 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 SLC22A9Q8IVM8 553 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 TLR8Q9NR97 1041 aaKnown RBP16.72■□□□□ 0.27
LMBR1-202ENST00000359422 RAB21Q9UL25 225 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 DYRK1BQ9Y463 629 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 FCHO1O14526 889 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
LMBR1-202ENST00000359422 KRT6AP02538 564 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 KRT6BP04259 564 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 SERPINE1P05121 402 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 GRK3P35626 688 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 KRT6CP48668 564 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 ZNF844Q08AG5 666 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 TRAF2Q12933 501 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 STARD3Q14849 445 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 IZUMO2Q6UXV1 221 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 P2RX7Q99572 595 aaKnown RBP16.72■□□□□ 0.27
LMBR1-202ENST00000359422 ATP13A1Q9HD20 1204 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 RRN3Q9NYV6 651 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 DDX20Q9UHI6 824 aaKnown RBP16.72■□□□□ 0.27
LMBR1-202ENST00000359422 POLG2Q9UHN1 485 aa16.72■□□□□ 0.27
LMBR1-202ENST00000359422 SALL1Q9NSC2 1324 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 LINC00854A0A1B0GVQ3 168 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 WNT10BO00744 389 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 TRIM16LQ309B1 348 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 APBB2Q92870 758 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 FBXO44Q9H4M3 255 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 AVENQ9NQS1 362 aaPredicted RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 PAIP2BQ9ULR5 123 aaKnown RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 PCDHB5Q9Y5E4 795 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 COPG1Q9Y678 874 aaKnown RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 RNASEH1O60930 286 aaKnown RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 SLC2A4P14672 509 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 OASLQ15646 514 aaKnown RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 PKN2Q16513 984 aaKnown RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 MFSD4BQ5TF39 518 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 ILDR1Q86SU0 546 aaPredicted RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 KCNMB4Q86W47 210 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 CATSPER2Q96P56 530 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 NINJ2Q9NZG7 142 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 LACTBL1A8MY62 500 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 SMNDC1O75940 238 aaKnown RBP eCLIP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 KPNA1P52294 538 aaPredicted RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 VAC14Q08AM6 782 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 TMPRSS6Q8IU80 811 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 RNF148Q8N7C7 305 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 LRRN4CLQ8ND94 238 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 SNRNP27Q8WVK2 155 aaKnown RBP16.71■□□□□ 0.27
LMBR1-202ENST00000359422 KAT5Q92993 513 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 ABHD16BQ9H3Z7 469 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 DNAJC18Q9H819 358 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 ENTPD7Q9NQZ7 604 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 KCNQ5Q9NR82 932 aa16.71■□□□□ 0.27
LMBR1-202ENST00000359422 TISP43B9A030 160 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 F8VP50 259 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 NKRFO15226 690 aaKnown RBP eCLIP16.71■□□□□ 0.26
LMBR1-202ENST00000359422 USP12O75317 370 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 MICAL2O94851 1124 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 DEFB128Q7Z7B8 93 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 POU5F2Q8N7G0 328 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 MTERF3Q96E29 417 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 SEPHS2Q99611 448 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 CHST7Q9NS84 486 aa16.71■□□□□ 0.26
LMBR1-202ENST00000359422 SNTNA6NMZ2 147 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 STRNO43815 780 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 CLPTM1O96005 669 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 YBX3P16989 372 aaKnown RBP eCLIP16.7■□□□□ 0.269e-8■■■□□ 14.6
LMBR1-202ENST00000359422 SKIV2L2P42285 1042 aaKnown RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 NIPA1Q7RTP0 329 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 ZDHHC17Q8IUH5 632 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 PRKD2Q9BZL6 878 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 PADI4Q9UM07 663 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 MRPL42Q9Y6G3 142 aaKnown RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 CCNT2O60583 730 aaKnown RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 EIF4BP23588 611 aaKnown RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 SLC1A6P48664 564 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 CCNG1P51959 295 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 RPS7P62081 194 aaKnown RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 TBX2Q13207 712 aaPredicted RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 TAF2Q6P1X5 1199 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 RIPOR1Q6ZS17 1223 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 DDHD1Q8NEL9 900 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 A1CFQ9NQ94 594 aaKnown RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 CXCL11O14625 94 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 KATNA1O75449 491 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 MYL4P12829 197 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 ALDH5A1P51649 535 aaPredicted RBP16.7■□□□□ 0.26
LMBR1-202ENST00000359422 TBCELQ5QJ74 424 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 ANKS6Q68DC2 871 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 NECAB2Q7Z6G3 386 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 CREG2Q8IUH2 290 aa16.7■□□□□ 0.26
LMBR1-202ENST00000359422 MAP4K3Q8IVH8 894 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms