RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 WBP1LQ9NX94 342 aa19.25■□□□□ 0.67
SNX11-201ENST00000359238 ZNF638Q14966 1978 aaKnown RBP19.25■□□□□ 0.67
SNX11-201ENST00000359238 PRPF4O43172 522 aaKnown RBP eCLIP19.24■□□□□ 0.67
SNX11-201ENST00000359238 ITGB1P05556 798 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 CDKN2BP42772 138 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 SERPINB4P48594 390 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 VPS41P49754 854 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 PTK6Q13882 451 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 MRPL10Q7Z7H8 261 aaKnown RBP19.24■□□□□ 0.67
SNX11-201ENST00000359238 UNC93AQ86WB7 457 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 NR1H4Q96RI1 486 aaPredicted RBP19.24■□□□□ 0.67
SNX11-201ENST00000359238 VCX3BQ9H321 246 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 RSAD1Q9HA92 442 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 VCX3AQ9NNX9 186 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 SLCO1B3Q9NPD5 702 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 CYLDQ9NQC7 956 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 GIT1Q9Y2X7 761 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 C2CD2LO14523 706 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 PQBP1O60828 265 aaKnown RBP19.24■□□□□ 0.67
SNX11-201ENST00000359238 PYGBP11216 843 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 PNPLA4P41247 253 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 ITGA8P53708 1063 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 SV2CQ496J9 727 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 CCDC14Q49A88 953 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 DSTYKQ6XUX3 929 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 FAM126BQ8IXS8 530 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 ZNF398Q8TD17 642 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 LINC01599Q8WXQ3 324 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 SPOCK2Q92563 424 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 SENP8Q96LD8 212 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 PWWP2AQ96N64 755 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 TSPAN18Q96SJ8 248 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 SNX25Q9H3E2 840 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 PCDH10Q9P2E7 1040 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 KIAA1257Q9ULG3 409 aa19.24■□□□□ 0.67
SNX11-201ENST00000359238 TSC2P49815 1807 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 hCG_1818297A0A087WSY0 165 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 CCDC22O60826 627 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 HUS1O60921 280 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 ZNF623O75123 536 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 ZWINTO95229 277 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 LCP1P13796 627 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 CDK7P50613 346 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 DYNLT1P63172 113 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 TAP1Q03518 808 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 MMRN1Q13201 1228 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 CTC1Q2NKJ3 1217 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 ARHGAP17Q68EM7 881 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 CD300LGQ6UXG3 332 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 TMEM110Q86TL2 294 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 RELL1Q8IUW5 271 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 CCNJLQ8IV13 435 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 NDNQ99608 321 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 TRAIPQ9BWF2 469 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 RHOBTB2Q9BYZ6 727 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 CRTAC1Q9NQ79 661 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 SLC38A7Q9NVC3 462 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 STX18Q9P2W9 335 aaKnown RBP19.23■□□□□ 0.67
SNX11-201ENST00000359238 DNPEPQ9ULA0 475 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 CAPN9O14815 690 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 KRT36O76013 467 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 PSMG1O95456 288 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 ETS1P14921 441 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 PDGFRAP16234 1089 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 BRCC3P46736 316 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 PABPC1LQ4VXU2 614 aaKnown RBP19.23■□□□□ 0.67
SNX11-201ENST00000359238 ACSBG2Q5FVE4 666 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 LRRC8DQ7L1W4 858 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 NLRP9Q7RTR0 991 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 TRABD2AQ86V40 505 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 B3GALNT2Q8NCR0 500 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 FNIP1Q8TF40 1166 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 HSPH1Q92598 858 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 BTBD10Q9BSF8 475 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 TUBB6Q9BUF5 446 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 DNAJC17Q9NVM6 304 aaKnown RBP19.23■□□□□ 0.67
SNX11-201ENST00000359238 GPATCH2LQ9NWQ4 482 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 DDX43Q9NXZ2 648 aaKnown RBP19.23■□□□□ 0.67
SNX11-201ENST00000359238 ZNF212Q9UDV6 495 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 ANAPC5Q9UJX4 755 aa19.23■□□□□ 0.67
SNX11-201ENST00000359238 MAP3K7O43318 606 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 PENKP01210 267 aaPredicted RBP19.22■□□□□ 0.67
SNX11-201ENST00000359238 ZSCAN5DPP0CG00 497 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 TMED2Q15363 201 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 TIGD5Q53EQ6 642 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 CLNKQ7Z7G1 428 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 TRIM74Q86UV6 250 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 TRIM73Q86UV7 250 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 TTC39CQ8N584 583 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 ATXN10Q9UBB4 475 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 NEU2Q9Y3R4 380 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 GABRDO14764 452 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 NDUFV1P49821 464 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 ZNF143P52747 638 aaPredicted RBP19.22■□□□□ 0.67
SNX11-201ENST00000359238 UPP1Q16831 310 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 LRRC38Q5VT99 294 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 RCOR2Q8IZ40 523 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 ANKRD52Q8NB46 1076 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 PLVAPQ9BX97 442 aa19.22■□□□□ 0.67
SNX11-201ENST00000359238 OGDHLQ9ULD0 1010 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms