RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 SSC5DA1L4H1 1573 aa24.43■■□□□ 1.5
NPAS3-203ENST00000357798 COX4I1P13073 169 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 HARS2P49590 506 aaKnown RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 PDE1CQ14123 709 aaPredicted RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 GCNAQ96QF7 691 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ACO2Q99798 780 aaKnown RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 RTKNQ9BST9 563 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ANK1P16157 1881 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 GCATO75600 419 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ALDH1A2O94788 518 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ALDOAP04075 364 aaKnown RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 INSCQ1MX18 579 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 RAB6CQ53S08 254 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 TRNP1Q6NT89 227 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ZNF526Q8TF50 670 aaPredicted RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ZFRQ96KR1 1074 aaKnown RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 SHCBP1LQ9BZQ2 653 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 RAB6CQ9H0N0 254 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 RAB26Q9ULW5 256 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 CAPN8A6NHC0 703 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 M0QYV0 167 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 TPP1O14773 563 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 METTL18O95568 372 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 PDGFRAP16234 1089 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 HMGB2P26583 209 aaKnown RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ABCE1P61221 599 aaKnown RBP24.42■■□□□ 1.5
NPAS3-203ENST00000357798 NIPAL4Q0D2K0 466 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 BOLA3Q53S33 107 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ZNF667Q5HYK9 610 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 ATG4CQ96DT6 458 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 IFT122Q9HBG6 1241 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 PCDH18Q9HCL0 1135 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 LMCD1Q9NZU5 365 aa24.42■■□□□ 1.5
NPAS3-203ENST00000357798 SCN4AP35499 1836 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 CLPTM1O96005 669 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 TFAP2AP05549 437 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 NCF2P19878 526 aaPredicted RBP24.41■■□□□ 1.5
NPAS3-203ENST00000357798 GPD2P43304 727 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 C15orf59Q2T9L4 293 aaPredicted RBP24.41■■□□□ 1.5
NPAS3-203ENST00000357798 RBM44Q6ZP01 1051 aaKnown RBP24.41■■□□□ 1.5
NPAS3-203ENST00000357798 TMEM126BQ8IUX1 230 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 C10orf107Q8IVU9 208 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 PCDH19Q8TAB3 1148 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 MRPS26Q9BYN8 205 aaKnown RBP24.41■■□□□ 1.5
NPAS3-203ENST00000357798 XPNPEP3Q9NQH7 507 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 B4GALT4O60513 344 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 NAB1Q13506 487 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 PACS1Q6VY07 963 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 CIDEBQ9UHD4 219 aa24.41■■□□□ 1.5
NPAS3-203ENST00000357798 STRNO43815 780 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 DNAJA2O60884 412 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 PMLP29590 882 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 ATG14Q6ZNE5 492 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 ALDH16A1Q8IZ83 802 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 PREBQ9HCU5 417 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 COL11A1P12107 1806 aaPredicted RBP24.4■■□□□ 1.5
NPAS3-203ENST00000357798 IRF6O14896 467 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 ONECUT3O60422 494 aaPredicted RBP24.4■■□□□ 1.5
NPAS3-203ENST00000357798 CDH8P55286 799 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 USP46P62068 366 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 ORC1Q13415 861 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 TARBP2Q15633 366 aaKnown RBP24.4■■□□□ 1.5
NPAS3-203ENST00000357798 SEPT12Q8IYM1 358 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 PHTF2Q8N3S3 785 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 CATSPER1Q8NEC5 780 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 LZICQ8WZA0 190 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 WNK4Q96J92 1243 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 TWNKQ96RR1 684 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 GMEB1Q9Y692 573 aa24.4■■□□□ 1.5
NPAS3-203ENST00000357798 PRKCGP05129 697 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 CCDC130P13994 396 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 MYBPC3Q14896 1274 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 AHI1Q8N157 1196 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 CDKL2Q92772 493 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 ELOVL4Q9GZR5 314 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 GALNT8Q9NY28 637 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 HSFX1Q9UBD0 423 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 STK39Q9UEW8 545 aa24.39■■□□□ 1.5
NPAS3-203ENST00000357798 PRPF19Q9UMS4 504 aaKnown RBP24.39■■□□□ 1.5
NPAS3-203ENST00000357798 LOC100653049A0A140TA62 436 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.39■■□□□ 1.49
NPAS3-203ENST00000357798 KRT34O76011 436 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 SP2Q02086 613 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 KLF10Q13118 480 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 SEMA5AQ13591 1074 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 HSP90AA5PQ58FG0 334 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 TMEM176AQ96HP8 235 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 TBCBQ99426 244 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 ZNF670Q9BS34 389 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 RBM38Q9H0Z9 239 aaKnown RBP24.39■■□□□ 1.49
NPAS3-203ENST00000357798 ZNF696Q9H7X3 374 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 COPG2Q9UBF2 871 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 MGAMO43451 1857 aa24.39■■□□□ 1.49
NPAS3-203ENST00000357798 ZNF487B1APH4 448 aa24.38■■□□□ 1.49
NPAS3-203ENST00000357798 RALBP11234 206 aa24.38■■□□□ 1.49
NPAS3-203ENST00000357798 ARRB2P32121 409 aa24.38■■□□□ 1.49
NPAS3-203ENST00000357798 INHBCP55103 352 aa24.38■■□□□ 1.49
NPAS3-203ENST00000357798 CDO1Q16878 200 aa24.38■■□□□ 1.49
NPAS3-203ENST00000357798 RARS2Q5T160 578 aaKnown RBP24.38■■□□□ 1.49
NPAS3-203ENST00000357798 EFCAB3Q8N7B9 438 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms