RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 QRFPRQ96P65 431 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 KCTD14Q9BQ13 255 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 ACTR8Q9H981 624 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 VTA1Q9NP79 307 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 USP15Q9Y4E8 981 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-202ENST00000356435 KIF20BQ96Q89 1820 aa5.68□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM49D1C9J1S8 452 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CES2O00748 559 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 OPLAHO14841 1288 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RGL2O15211 777 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CCNT2O60583 730 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 VPS4BO75351 444 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SUPT7LO94864 414 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ECDO95905 644 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CYP11B2P19099 503 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SERPINB3P29508 390 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PSMC6P62333 389 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 XRCC4Q13426 336 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FUT11Q495W5 492 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ARMCX4Q5H9R4 360 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PAGE2BQ5JRK9 111 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MROH9Q5TGP6 573 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PCNX4Q63HM2 1172 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF473Q8WTR7 871 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 BSNDQ8WZ55 320 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 UROC1Q96N76 676 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 IRX2Q9BZI1 471 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 GTF3C4Q9UKN8 822 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SNX6Q9UNH7 406 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 HPS5Q9UPZ3 1129 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 C1orf167Q5SNV9 1468 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NTSR2O95665 410 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 POMCP01189 267 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 VTNP04004 478 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RPA1P27694 616 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PEX5P50542 639 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NUDT2P50583 147 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CLCN3P51790 818 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TKTL1P51854 596 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TRIP10Q15642 601 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CNGA2Q16280 664 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CCDC92Q53HC0 331 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 HASPINQ8TF76 798 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 BBS4Q96RK4 519 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SYT15Q9BQS2 421 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RUSC1Q9BVN2 902 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RRAGCQ9HB90 399 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CHORDC1Q9UHD1 332 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CHD1O14646 1710 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CASTOR2A6NHX0 329 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SAC3D1A6NKF1 404 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RAD51BO15315 384 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ACSL4O60488 711 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ENDOD1O94919 500 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 DLGAP3O95886 979 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 POLR2LP62875 67 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SPIDRQ14159 915 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FBXO47Q5MNV8 452 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RINLQ6ZS11 566 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 C3orf62Q6ZUJ4 267 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF410Q86VK4 478 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CBWD2Q8IUF1 395 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FUKQ8N0W3 1084 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 UBE2E3Q969T4 207 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 OMDQ99983 421 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SLC40A1Q9NP59 571 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 DNPEPQ9ULA0 475 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SIK3Q9Y2K2 1263 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM17Q9Y577 477 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TRPV2Q9Y5S1 764 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SF3B1O75533 1304 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MYPNQ86TC9 1320 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TRAV19A0A0A6YYK7 116 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 IGF2BP3O00425 579 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SKAP2O75563 359 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 UMPSP11172 480 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 VAV1P15498 845 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZNF7P17097 686 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FMR1Q06787 632 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 GRIK3Q13003 919 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NFYCQ13952 458 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FAM171A1Q5VUB5 890 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MACC1Q6ZN28 852 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 USP45Q70EL2 814 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CLEC10AQ8IUN9 316 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RMND5BQ96G75 393 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 OLFM1Q99784 485 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZSWIM1Q9BR11 485 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PRKD2Q9BZL6 878 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZDHHC6Q9H6R6 413 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MRPL17Q9NRX2 175 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PPIEQ9UNP9 301 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ANKRD6Q9Y2G4 727 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FAM25AB3EWG3 89 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FAM25CB3EWG5 89 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FAM25GB3EWG6 89 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MSH4O15457 936 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TEX33O43247 280 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ADCY6O43306 1168 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms