RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 CNGB3Q9NQW8 809 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 THAP10Q9P2Z0 257 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-204ENST00000356316 SUSD2Q9UGT4 822 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 PCDHB4Q9Y5E5 795 aa11.14□□□□□ -0.63
CAPN3-204ENST00000356316 SPTBN2O15020 2390 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 ADAMTS9Q9P2N4 1935 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 BICDL2A1A5D9 508 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 TRIM49BA6NDI0 452 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 TULP2O00295 520 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 TSPAN3O60637 253 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 OPHN1O60890 802 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 KRT37O76014 449 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 PAEPP09466 180 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 CD6P30203 668 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 FMO5P49326 533 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 PMS1P54277 932 aaKnown RBP11.13□□□□□ -0.63
CAPN3-204ENST00000356316 STILQ15468 1287 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 TRIP4Q15650 581 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-204ENST00000356316 PLEKHG6Q3KR16 790 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 FUT11Q495W5 492 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 ADGRF1Q5T601 910 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 PEAR1Q5VY43 1037 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-204ENST00000356316 LCLAT1Q6UWP7 414 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 SERPINA13PQ6UXR4 307 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 METTL3Q86U44 580 aaKnown RBP11.13□□□□□ -0.63
CAPN3-204ENST00000356316 TMPRSS6Q8IU80 811 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 ZC3H3Q8IXZ2 948 aaKnown RBP11.13□□□□□ -0.63
CAPN3-204ENST00000356316 DEFB124Q8NES8 71 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 ENGASEQ8NFI3 743 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 SPATA20Q8TB22 786 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 ERCC4Q92889 916 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-204ENST00000356316 SLC35C1Q96A29 364 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 SIPA1Q96FS4 1042 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 PIWIL1Q96J94 861 aaKnown RBP11.13□□□□□ -0.63
CAPN3-204ENST00000356316 SLC6A17Q9H1V8 727 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 ITM2CQ9NQX7 267 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 SFMBT1Q9UHJ3 866 aa11.13□□□□□ -0.63
CAPN3-204ENST00000356316 YJEFN3A6XGL0 299 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 MEI4A8MW99 385 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 E7ENQ6 273 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 EPHX1P07099 455 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 IL12RB1P42701 662 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 SLC11A2P49281 568 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 ZNF234Q14588 700 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 CNGA2Q16280 664 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 KLHL10Q6JEL2 608 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 SLC41A1Q8IVJ1 513 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 CCDC117Q8IWD4 279 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-204ENST00000356316 UNC45BQ8IWX7 931 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 CADM4Q8NFZ8 388 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 IRGQQ8WZA9 623 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 TOE1Q96GM8 510 aaKnown RBP11.12□□□□□ -0.63
CAPN3-204ENST00000356316 NUP58Q9BVL2 599 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 GPR174Q9BXC1 333 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 PI4KAP42356 2102 aa11.12□□□□□ -0.63
CAPN3-204ENST00000356316 TYW5A2RUC4 315 aaKnown RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 UPK3BL1B0FP48 263 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 UPK3BL2E5RIL1 263 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 M0QYV0 167 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 O00370 1275 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 PIK3R2O00459 728 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 PMM2O15305 246 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 P4HA2O15460 535 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 FGFR1OPO95684 399 aaKnown RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 LATS1O95835 1130 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 GNA14O95837 355 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 ATP5BP06576 529 aaKnown RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 NCAM1P13591 858 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 RGS7P49802 495 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 TPMTP51580 245 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 DAOAP59103 153 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 SEMA3BQ13214 749 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 ENPP2Q13822 863 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 HNRNPDQ14103 355 aaKnown RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 FNDC3BQ53EP0 1204 aaKnown RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 NUGGCQ68CJ6 796 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 FAM217AQ8IXS0 508 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 ELOA2Q8IYF1 753 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 SCML4Q8N228 414 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 MINDY1Q8N5J2 469 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 ZNF557Q8N988 423 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 WFIKKN2Q8TEU8 576 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 SLC35F5Q8WV83 523 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 NELFBQ8WX92 580 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 DDX50Q9BQ39 737 aaKnown RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 ZDHHC5Q9C0B5 715 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 MKRN2Q9H000 416 aaKnown RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 MIR1-1HGQ9H1L0 117 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 CAPN10Q9HC96 672 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 CD248Q9HCU0 757 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 FSCN3Q9NQT6 498 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 WSB2Q9NYS7 404 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-204ENST00000356316 MAN1B1Q9UKM7 699 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
CAPN3-204ENST00000356316 IRAK2O43187 625 aa11.1□□□□□ -0.63
CAPN3-204ENST00000356316 FBXO21O94952 628 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms