RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GBP6Q6ZN66 633 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 PASD1Q8IV76 773 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 CHPFQ8IZ52 775 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 PRICKLE1Q96MT3 831 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 ST7Q9NRC1 585 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 APEX2Q9UBZ4 518 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 STON1Q9Y6Q2 735 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 TM4SF5O14894 197 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 PRKCHP24723 683 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 DHPSP49366 369 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 ELF2Q15723 593 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 MAN2A1Q16706 1144 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 EXOC3L4Q17RC7 722 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 RNF43Q68DV7 783 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 TAC4Q86UU9 113 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 PGBD3Q8N328 593 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 KCNV2Q8TDN2 545 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 DDI1Q8WTU0 396 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 CPXM1Q96SM3 734 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 THAP9Q9H5L6 903 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 PLCB1Q9NQ66 1216 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 FSCN3Q9NQT6 498 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 THAP10Q9P2Z0 257 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 DNAJC12Q9UKB3 198 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 PCDHGA5Q9Y5G8 931 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 SPTBN2O15020 2390 aa17.43■□□□□ 0.38
PDLIM7-201ENST00000355572 LAMA1P25391 3075 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 IGHV1OR15-9A0A0B4J2B8 117 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 GTPBP10A4D1E9 387 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 FOXN3O00409 490 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 ALDH1A2O94788 518 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 RHOBTB1O94844 696 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 CAVIN2O95810 425 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 NCAM1P13591 858 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 HLA-EP13747 358 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 CLCN1P35523 988 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 USP8P40818 1118 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 TBX4P57082 545 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 PDCLQ13371 301 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 ZNF234Q14588 700 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 FUT11Q495W5 492 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 AASDHQ4L235 1098 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 ZNF366Q8N895 744 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 LMLNQ96KR4 655 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 MRGPRX1Q96LB2 322 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 RTKNQ9BST9 563 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 ADAM33Q9BZ11 813 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 MKRN2Q9H000 416 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 CYP8B1Q9UNU6 501 aa17.42■□□□□ 0.38
PDLIM7-201ENST00000355572 TP53BP1Q12888 1972 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 LNP1A1A4G5 178 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 ACSL4O60488 711 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 CD70P32970 193 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 HARS2P49590 506 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 EIF4EBP2Q13542 120 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 VWA3BQ502W6 1294 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 ADGRF1Q5T601 910 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 PIK3R6Q5UE93 754 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 TRMT11Q7Z4G4 463 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 ANKS1BQ7Z6G8 1248 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 KIAA0907Q7Z7F0 614 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 TMEM110Q86TL2 294 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 ADIPOR2Q86V24 386 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 SLC47A2Q86VL8 602 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 CYB5D2Q8WUJ1 264 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 TUBGCP2Q9BSJ2 902 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 NUCKS1Q9H1E3 243 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 NDST4Q9H3R1 872 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 VPS45Q9NRW7 570 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 ELOVL2Q9NXB9 296 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 FHOD1Q9Y613 1164 aa17.41■□□□□ 0.38
PDLIM7-201ENST00000355572 ASCC3Q8N3C0 2202 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 KCNJ18B7U540 433 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 FBXO21O94952 628 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 IGLV3-25P01717 112 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 ERBB2P04626 1255 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 ITPKAP23677 461 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 KLK7P49862 253 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 COPAP53621 1224 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 RPS24P62847 133 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 IRX4P78413 519 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 PTPRNQ16849 979 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 PREPLQ4J6C6 727 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 MPPE1Q53F39 396 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 STPG1Q5TH74 334 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 OTUD1Q5VV17 481 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 RBM43Q6ZSC3 357 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 C12orf50Q8NA57 414 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 C1orf131Q8NDD1 294 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 FAM149B1Q96BN6 582 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 TMA16Q96EY4 203 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 MTG2Q9H4K7 406 aa17.4■□□□□ 0.38
PDLIM7-201ENST00000355572 ABCB8Q9NUT2 735 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms