RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 FAM131AQ6UXB0 335 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PROX1Q92786 737 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SPACA7Q96KW9 195 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 UBQLN1Q9UMX0 589 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 CCDC163A0A0D9SF12 145 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SLC16A4O15374 487 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MAGEB3O15480 346 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 TGM2P21980 687 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 AP2S1P53680 142 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PTPN5P54829 565 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MYBPC3Q14896 1274 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SNRNP48Q6IEG0 339 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 CXXC5Q7LFL8 322 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PHACTR4Q8IZ21 702 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 RASGEF1AQ8N9B8 481 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 KRT35Q92764 455 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 GMCL1Q96IK5 515 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MAGEB18Q96M61 343 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 C9orf16Q9BUW7 83 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 A0A087WXM4 84 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 C2orf81A6NN90 581 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 DBIP07108 87 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MAN2A2P49641 1150 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 C2orf76Q3KRA6 126 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 TMEM110Q86TL2 294 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 CMTR2Q8IYT2 770 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 ZNF366Q8N895 744 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 C18orf8Q96DM3 657 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 AKAP7Q9P0M2 348 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 TAGLN3Q9UI15 199 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 ATXN2Q99700 1313 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 RAD17O75943 681 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 UPP2O95045 317 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 RGS19P49795 217 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MGAT5Q09328 741 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PIGHQ14442 188 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 ARHGAP15Q53QZ3 475 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 IRAK1BP1Q5VVH5 260 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 CNSTQ6PJW8 725 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 FICDQ9BVA6 458 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MRPL4Q9BYD3 311 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 GGA2Q9UJY4 613 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 ZNF225Q9UK10 706 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SMTNL2Q2TAL5 461 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MTSS1LQ765P7 747 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SPAG16Q8N0X2 631 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 DHRSXQ8N5I4 330 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 C3orf20Q8ND61 904 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PIK3R3Q92569 461 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PHF12Q96QT6 1004 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SP140LQ9H930 580 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 RBAKQ9NYW8 714 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SSR3Q9UNL2 185 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 REXO2Q9Y3B8 237 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PCDHB6Q9Y5E3 794 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 CD3EAPO15446 510 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 VPS26AO75436 327 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 FARP2O94887 1054 aaPredicted RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 POLR2EP19388 210 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MCPH1Q8NEM0 835 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 EXO5Q9H790 373 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 WDR19Q8NEZ3 1342 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 USP27XA6NNY8 438 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 MID1O15344 667 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 PLIN3O60664 434 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 METTL18O95568 372 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 FDPSP14324 419 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 TUBA4AP68366 448 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 UNC13DQ70J99 1090 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 DGCR14Q96DF8 476 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 UCKL1Q9NWZ5 548 aa8.22□□□□□ -1.09
SCN8A-201ENST00000354534 TRNAU1APQ9NX07 287 aaKnown RBP8.22□□□□□ -1.09
SCN8A-201ENST00000354534 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.09
SCN8A-201ENST00000354534 NSUN7Q8NE18 718 aaKnown RBP8.21□□□□□ -1.09
SCN8A-201ENST00000354534 SEMA4DQ92854 862 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 CATSPERBQ9H7T0 1116 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 DBNDD1Q9H9R9 158 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 ZNF232Q9UNY5 417 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 TTC34A8MYJ7 566 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 ERVV-2B6SEH9 535 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 SERPINA1P01009 418 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 C9P02748 559 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 GNAO1P09471 354 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 AQP5P55064 265 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 KCNMA1Q12791 1236 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 ENOSF1Q7L5Y1 443 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 MND1Q9BWT6 205 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 FAM49BQ9NUQ9 324 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 PAK5Q9P286 719 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 EDARQ9UNE0 448 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 SH3BP1Q9Y3L3 701 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 PGRMC2O15173 223 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 PRPF3O43395 683 aaKnown RBP8.21□□□□□ -1.09
SCN8A-201ENST00000354534 BMP3P12645 472 aa8.21□□□□□ -1.09
SCN8A-201ENST00000354534 ASMTP46597 345 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms