RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TRPC3Q13507 836 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 C10orf120Q5SQS8 335 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 PDILTQ8N807 584 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 ZNF366Q8N895 744 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 ZNF248Q8NDW4 579 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 ZMIZ2Q8NF64 920 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 SAP25Q8TEE9 199 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
DDX55-202ENST00000354291 SMOQ99835 787 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
DDX55-202ENST00000354291 CLEC4EQ9ULY5 219 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 CLCA2Q9UQC9 943 aa16.65■□□□□ 0.26
DDX55-202ENST00000354291 PTPN13Q12923 2485 aa16.64■□□□□ 0.26
DDX55-202ENST00000354291 STC2O76061 302 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 KLKB1P03952 638 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
DDX55-202ENST00000354291 CHKAP35790 457 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 MYL6P60660 151 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 RACK1P63244 317 aaKnown RBP16.64■□□□□ 0.25
DDX55-202ENST00000354291 PKDCCQ504Y2 493 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 FNDC3BQ53EP0 1204 aaKnown RBP16.64■□□□□ 0.25
DDX55-202ENST00000354291 STXBP4Q6ZWJ1 553 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 FUKQ8N0W3 1084 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 GANCQ8TET4 914 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 TSC1Q92574 1164 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 JAKMIP2Q96AA8 810 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 SKA1Q96BD8 255 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 CCDC127Q96BQ5 260 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 SLC6A18Q96N87 628 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 CUEDC2Q9H467 287 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 NMUR1Q9HB89 426 aa16.64■□□□□ 0.25
DDX55-202ENST00000354291 MYLKQ15746 1914 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 A0A1W2PQH9 124 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 KIAA0391O15091 583 aaKnown RBP16.63■□□□□ 0.25
DDX55-202ENST00000354291 CYP26A1O43174 497 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 TIMM44O43615 452 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 YEATS4O95619 227 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 DNTTP04053 509 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 CYBBP04839 570 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 HMBSP08397 361 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 CCDC130P13994 396 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 AMPD3Q01432 767 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 CAMK2GQ13555 558 aaPredicted RBP16.63■□□□□ 0.25
DDX55-202ENST00000354291 EIF4HQ15056 248 aaKnown RBP16.63■□□□□ 0.25
DDX55-202ENST00000354291 SHBQ15464 509 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 TMEM215Q68D42 235 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 ACOT1Q86TX2 421 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 CYB5D2Q8WUJ1 264 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 TNIP3Q96KP6 325 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 ORAI3Q9BRQ5 295 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 TNMDQ9H2S6 317 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 SGK2Q9HBY8 427 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 AASDHPPTQ9NRN7 309 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 HSPBP1Q9NZL4 362 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 PLA2G4CQ9UP65 541 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 SCML2Q9UQR0 700 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 ZNF510Q9Y2H8 683 aa16.63■□□□□ 0.25
DDX55-202ENST00000354291 UNC79Q9P2D8 2635 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 CUTAO60888 179 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 UCNP55089 124 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 PCBP4P57723 403 aaKnown RBP16.62■□□□□ 0.25
DDX55-202ENST00000354291 RPS14P62263 151 aaKnown RBP16.62■□□□□ 0.25
DDX55-202ENST00000354291 SRSF1Q07955 248 aaKnown RBP eCLIP16.62■□□□□ 0.259e-8■■■□□ 16.2
DDX55-202ENST00000354291 BNIP3Q12983 259 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 KIAA0895LQ68EN5 471 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 PRICKLE2Q7Z3G6 844 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 IQUBQ8NA54 791 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 RBBP8NLQ8NC74 664 aaPredicted RBP16.62■□□□□ 0.25
DDX55-202ENST00000354291 SLC2A14Q8TDB8 520 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 DDI1Q8WTU0 396 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 KBTBD4Q9NVX7 518 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 NAGPAQ9UK23 515 aa16.62■□□□□ 0.25
DDX55-202ENST00000354291 PHACTR2O75167 634 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 WNT1P04628 370 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 IGHV4-34P06331 123 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 CKMT2P17540 419 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 CORO1AP31146 461 aaKnown RBP16.61■□□□□ 0.25
DDX55-202ENST00000354291 INSM1Q01101 510 aaPredicted RBP16.61■□□□□ 0.25
DDX55-202ENST00000354291 ILKQ13418 452 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 E2F4Q16254 413 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 KLHDC10Q6PID8 442 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 SCARA5Q6ZMJ2 495 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 GPRIN1Q7Z2K8 1008 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 ELMO3Q96BJ8 720 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 KIAA1586Q9HCI6 787 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 GDF3Q9NR23 364 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDX55-202ENST00000354291 NCKAP1Q9Y2A7 1128 aa16.61■□□□□ 0.25
DDX55-202ENST00000354291 MYH10P35580 1976 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 A0A1W2PPC4 97 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 KLK10O43240 276 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 ZSCAN22P10073 491 aaPredicted RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 ARRB1P49407 418 aaPredicted RBP16.6■□□□□ 0.25
DDX55-202ENST00000354291 CSRP3P50461 194 aa16.6■□□□□ 0.25
DDX55-202ENST00000354291 ZBTB16Q05516 673 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms