RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 COL1A2P08123 1366 aa18.75■□□□□ 0.59
APP-203ENST00000354192 SMIM35A0A1B0GVV1 85 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SLC15A5A6NIM6 579 aa18.74■□□□□ 0.59
APP-203ENST00000354192 NPR3P17342 541 aa18.74■□□□□ 0.59
APP-203ENST00000354192 ARFIP2P53365 341 aa18.74■□□□□ 0.59
APP-203ENST00000354192 XRCC4Q13426 336 aa18.74■□□□□ 0.59
APP-203ENST00000354192 ACCSLQ4AC99 568 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SDHAF4Q5VUM1 108 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SPNS2Q8IVW8 549 aa18.74■□□□□ 0.59
APP-203ENST00000354192 WNT8BQ93098 351 aa18.74■□□□□ 0.59
APP-203ENST00000354192 TRIM55Q9BYV6 548 aa18.74■□□□□ 0.59
APP-203ENST00000354192 ARHGAP39Q9C0H5 1083 aa18.74■□□□□ 0.59
APP-203ENST00000354192 ACTL7BQ9Y614 415 aa18.74■□□□□ 0.59
APP-203ENST00000354192 PTGESO14684 152 aa18.74■□□□□ 0.59
APP-203ENST00000354192 ZWINTO95229 277 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SNRPAP09012 282 aaKnown RBP18.74■□□□□ 0.59
APP-203ENST00000354192 TGM2P21980 687 aa18.74■□□□□ 0.59
APP-203ENST00000354192 KCNA4P22459 653 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SERPINB4P48594 390 aa18.74■□□□□ 0.59
APP-203ENST00000354192 CPT1AP50416 773 aa18.74■□□□□ 0.59
APP-203ENST00000354192 NBPF20Q3BBV1 942 aa18.74■□□□□ 0.59
APP-203ENST00000354192 PKDCCQ504Y2 493 aa18.74■□□□□ 0.59
APP-203ENST00000354192 KIAA0319Q5VV43 1072 aa18.74■□□□□ 0.59
APP-203ENST00000354192 NCBP2-AS2Q69YL0 99 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SLC26A9Q7LBE3 791 aa18.74■□□□□ 0.59
APP-203ENST00000354192 NUDCD3Q8IVD9 361 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SCN4BQ8IWT1 228 aa18.74■□□□□ 0.59
APP-203ENST00000354192 AGAP11Q8TF27 550 aa18.74■□□□□ 0.59
APP-203ENST00000354192 SLC44A1Q8WWI5 657 aa18.74■□□□□ 0.59
APP-203ENST00000354192 MTMR10Q9NXD2 777 aa18.74■□□□□ 0.59
APP-203ENST00000354192 G3BP2Q9UN86 482 aaKnown RBP18.74■□□□□ 0.59
APP-203ENST00000354192 ATXN2Q99700 1313 aaKnown RBP18.73■□□□□ 0.59
APP-203ENST00000354192 PIRO00625 290 aa18.73■□□□□ 0.59
APP-203ENST00000354192 AMHP03971 560 aa18.73■□□□□ 0.59
APP-203ENST00000354192 MATKP42679 507 aa18.73■□□□□ 0.59
APP-203ENST00000354192 ARPP19P56211 112 aa18.73■□□□□ 0.59
APP-203ENST00000354192 TRIM32Q13049 653 aa18.73■□□□□ 0.59
APP-203ENST00000354192 EFHC1Q5JVL4 640 aa18.73■□□□□ 0.59
APP-203ENST00000354192 TTC39CQ8N584 583 aa18.73■□□□□ 0.59
APP-203ENST00000354192 BANPQ8N9N5 519 aa18.73■□□□□ 0.59
APP-203ENST00000354192 ANKLE1Q8NAG6 615 aa18.73■□□□□ 0.59
APP-203ENST00000354192 C3orf58Q8NDZ4 430 aa18.73■□□□□ 0.59
APP-203ENST00000354192 PCED1BQ96HM7 432 aa18.73■□□□□ 0.59
APP-203ENST00000354192 SYT15Q9BQS2 421 aa18.73■□□□□ 0.59
APP-203ENST00000354192 ZNF670Q9BS34 389 aa18.73■□□□□ 0.59
APP-203ENST00000354192 POPDC2Q9HBU9 364 aa18.73■□□□□ 0.59
APP-203ENST00000354192 CHADO15335 359 aa18.73■□□□□ 0.59
APP-203ENST00000354192 PRPF4O43172 522 aaKnown RBP eCLIP18.73■□□□□ 0.59
APP-203ENST00000354192 DNAJC8O75937 253 aaPredicted RBP18.73■□□□□ 0.59
APP-203ENST00000354192 APOEP02649 317 aa18.73■□□□□ 0.59
APP-203ENST00000354192 OR4Q2P0C623 313 aa18.73■□□□□ 0.59
APP-203ENST00000354192 MYL2P10916 166 aa18.73■□□□□ 0.59
APP-203ENST00000354192 EZRP15311 586 aaKnown RBP18.73■□□□□ 0.59
APP-203ENST00000354192 CD52P31358 61 aa18.73■□□□□ 0.59
APP-203ENST00000354192 TPI1P60174 286 aa18.73■□□□□ 0.59
APP-203ENST00000354192 BNIP1Q12981 228 aa18.73■□□□□ 0.59
APP-203ENST00000354192 ZBTB6Q15916 424 aa18.73■□□□□ 0.59
APP-203ENST00000354192 PPM1JQ5JR12 505 aa18.73■□□□□ 0.59
APP-203ENST00000354192 UBXN11Q5T124 520 aa18.73■□□□□ 0.59
APP-203ENST00000354192 CLEC20AQ6ZU45 233 aa18.73■□□□□ 0.59
APP-203ENST00000354192 UNC93AQ86WB7 457 aa18.73■□□□□ 0.59
APP-203ENST00000354192 OR52K1Q8NGK4 314 aa18.73■□□□□ 0.59
APP-203ENST00000354192 ATXN3LQ9H3M9 355 aa18.73■□□□□ 0.59
APP-203ENST00000354192 TMEM30AQ9NV96 361 aa18.73■□□□□ 0.59
APP-203ENST00000354192 CNTN3Q9P232 1028 aa18.73■□□□□ 0.59
APP-203ENST00000354192 MORF4L1Q9UBU8 362 aa18.73■□□□□ 0.59
APP-203ENST00000354192 THP07101 528 aa18.73■□□□□ 0.59
APP-203ENST00000354192 RPL10AP62906 217 aaKnown RBP18.73■□□□□ 0.59
APP-203ENST00000354192 MRPS5P82675 430 aaKnown RBP18.73■□□□□ 0.59
APP-203ENST00000354192 NT5DC4Q86YG4 428 aa18.73■□□□□ 0.59
APP-203ENST00000354192 GTF3C2Q8WUA4 911 aaPredicted RBP18.73■□□□□ 0.59
APP-203ENST00000354192 MOCOSQ96EN8 888 aa18.73■□□□□ 0.59
APP-203ENST00000354192 PPARGC1AQ9UBK2 798 aaKnown RBP18.73■□□□□ 0.59
APP-203ENST00000354192 STAP1Q9ULZ2 295 aa18.73■□□□□ 0.59
APP-203ENST00000354192 GNEQ9Y223 722 aaKnown RBP18.73■□□□□ 0.59
APP-203ENST00000354192 RPS6KL1Q9Y6S9 549 aa18.73■□□□□ 0.59
APP-203ENST00000354192 DFFAO00273 331 aa18.72■□□□□ 0.59
APP-203ENST00000354192 STK10O94804 968 aaKnown RBP18.72■□□□□ 0.59
APP-203ENST00000354192 OAS1P00973 400 aaKnown RBP18.72■□□□□ 0.59
APP-203ENST00000354192 MXRA7P84157 204 aa18.72■□□□□ 0.59
APP-203ENST00000354192 TTC39BQ5VTQ0 682 aaPredicted RBP18.72■□□□□ 0.59
APP-203ENST00000354192 LONP2Q86WA8 852 aa18.72■□□□□ 0.59
APP-203ENST00000354192 TDRPQ86YL5 185 aa18.72■□□□□ 0.59
APP-203ENST00000354192 ZNF358Q9NW07 568 aa18.72■□□□□ 0.59
APP-203ENST00000354192 PSAT1Q9Y617 370 aa18.72■□□□□ 0.59
APP-203ENST00000354192 PRRC2BQ5JSZ5 2229 aaKnown RBP18.72■□□□□ 0.59
APP-203ENST00000354192 NEBLO76041 1014 aa18.72■□□□□ 0.59
APP-203ENST00000354192 ZNF865P0CJ78 1059 aaPredicted RBP18.72■□□□□ 0.59
APP-203ENST00000354192 ERCC2P18074 760 aa18.72■□□□□ 0.59
APP-203ENST00000354192 KDSRQ06136 332 aa18.72■□□□□ 0.59
APP-203ENST00000354192 LGSNQ5TDP6 509 aa18.72■□□□□ 0.59
APP-203ENST00000354192 ALYREFQ86V81 257 aaKnown RBP18.72■□□□□ 0.59
APP-203ENST00000354192 EMID1Q96A84 441 aaPredicted RBP18.72■□□□□ 0.59
APP-203ENST00000354192 TMEM120AQ9BXJ8 343 aa18.72■□□□□ 0.59
APP-203ENST00000354192 DUSP16Q9BY84 665 aa18.72■□□□□ 0.59
APP-203ENST00000354192 CRTAC1Q9NQ79 661 aa18.72■□□□□ 0.59
APP-203ENST00000354192 RBM47A0AV96 593 aaKnown RBP18.71■□□□□ 0.59
APP-203ENST00000354192 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
APP-203ENST00000354192 TAZQ16635 292 aa18.71■□□□□ 0.59
APP-203ENST00000354192 SLC9A4Q6AI14 798 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms