RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CASKIN2Q8WXE0 1202 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 CPA5Q8WXQ8 436 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 RSPH1Q8WYR4 309 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 KRT35Q92764 455 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 IRF7Q92985 503 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 RSPRY1Q96DX4 576 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 TCEAL4Q96EI5 215 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 CAMK1GQ96NX5 476 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 CLSTN3Q9BQT9 956 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 GCOM2Q9BZD3 368 aaPredicted RBP8.61□□□□□ -1.03
CD44-205ENST00000352818 FAM129AQ9BZQ8 928 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 RAB17Q9H0T7 212 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 LHX5Q9H2C1 402 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 FAM114A2Q9NRY5 505 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 ADAM22Q9P0K1 906 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 PCYOX1Q9UHG3 505 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 ANAPC7Q9UJX3 599 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 SRPK3Q9UPE1 567 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 MYBPHLA2RUH7 354 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 SLC38A8A6NNN8 435 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 MYO1FO00160 1098 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 ZNF623O75123 536 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 POMCP01189 267 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 ITGA4P13612 1032 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 P4HA1P13674 534 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 CD59P13987 128 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 ECHS1P30084 290 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 HSPA9P38646 679 aaKnown RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 VIPR2P41587 438 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 ABCG1P45844 678 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 MARCKSL1P49006 195 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 CARSP49589 748 aaKnown RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 RNASE9P60153 205 aaKnown RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 INCA1Q0VD86 236 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 MAMLD1Q13495 774 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 HSP90B2PQ58FF3 399 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 PRSS36Q5K4E3 855 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 DGKKQ5KSL6 1271 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 SPDYCQ5MJ68 293 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 PPM1LQ5SGD2 360 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 PMS2CLQ68D20 193 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 JADE1Q6IE81 842 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 SLC27A1Q6PCB7 646 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 SLCO6A1Q86UG4 719 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 SLC13A5Q86YT5 568 aaPredicted RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 C1orf131Q8NDD1 294 aaKnown RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 SLCO2A1Q92959 643 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 ELMO3Q96BJ8 720 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 FAM212AQ96EL1 285 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 ASB16Q96NS5 453 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 ACAP3Q96P50 834 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 SH3GL2Q99962 352 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 AP1M1Q9BXS5 423 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 DDX47Q9H0S4 455 aaKnown RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 EPB41L5Q9HCM4 733 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 FSCN3Q9NQT6 498 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 FAM105AQ9NUU6 356 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 PARVAQ9NVD7 372 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 EVLQ9UI08 416 aaPredicted RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 RASAL2Q9UJF2 1139 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 STRIP2Q9ULQ0 834 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.6□□□□□ -1.03
CD44-205ENST00000352818 MRPS23Q9Y3D9 190 aaKnown RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 CEP83Q9Y592 693 aa8.6□□□□□ -1.03
CD44-205ENST00000352818 MTCL1Q9Y4B5 1905 aaKnown RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 USP9YO00507 2555 aaPredicted RBP8.6□□□□□ -1.03
CD44-205ENST00000352818 TMEM110-MUSTN1A8MSY1 372 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 CILPO75339 1184 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 RHOBTB1O94844 696 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 CALCAP01258 141 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 RHOP08100 348 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 FTH1P19P0C7X4 201 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 PYGMP11217 842 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 PSMC3P17980 439 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 BCKDHBP21953 392 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 BRD2P25440 801 aaKnown RBP8.59□□□□□ -1.03
CD44-205ENST00000352818 CCR2P41597 374 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 CCR10P46092 362 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 RAD23BP54727 409 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 OSTNP61366 133 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 RBP5P82980 135 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 DR1Q01658 176 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 DSC1Q08554 894 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 CAMK2BQ13554 666 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 SIX1Q15475 284 aaPredicted RBP8.59□□□□□ -1.03
CD44-205ENST00000352818 TERF2Q15554 542 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 RTP2Q5QGT7 225 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 PPP1R15BQ5SWA1 713 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 LRRC38Q5VT99 294 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 NOTUMQ6P988 496 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 MMS22LQ6ZRQ5 1243 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 CDR2LQ86X02 465 aaPredicted RBP8.59□□□□□ -1.03
CD44-205ENST00000352818 RHOT1Q8IXI2 618 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 GPR65Q8IYL9 337 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 KATNAL2Q8IYT4 538 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 NIPA2Q8N8Q9 360 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 PRELID2Q8N945 189 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 SLC7A14Q8TBB6 771 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms