RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF572Q7Z3I7 529 aaPredicted RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 MYLPFQ96A32 169 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 ZNF669Q96BR6 464 aaPredicted RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 HNRNPABQ99729 332 aaKnown RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 IKZF4Q9H2S9 585 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 EPS15L1Q9UBC2 864 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SLC30A1Q9Y6M5 507 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 CLUHO75153 1309 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 RIPK2O43353 540 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 BDNFP23560 247 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 PTPN9P43378 593 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 PARP6Q2NL67 630 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 USP41Q3LFD5 358 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SCARA3Q6AZY7 606 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 COLGALT1Q8NBJ5 622 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 CD99L2Q8TCZ2 262 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 HASPINQ8TF76 798 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 PGM2Q96G03 612 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.41
SMAD9-201ENST00000350148 FAM8A1Q9UBU6 413 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 DCDC2Q9UHG0 476 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 SQORQ9Y6N5 450 aa12.52□□□□□ -0.41
SMAD9-201ENST00000350148 GLRA3O75311 464 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 CST3P01034 146 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 TMED10P49755 219 aaKnown RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 DENND5BQ6ZUT9 1274 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 NPLOC4Q8TAT6 608 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 DNAJC25-GNG10A0A024R161 153 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 TMEM120BA0PK00 339 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 PDE2AO00408 941 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 KRT75O95678 551 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 CDH18Q13634 790 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 MAPRE2Q15555 327 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 DEFB128Q7Z7B8 93 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 DNAAF5Q86Y56 855 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 LRRC37BQ96QE4 947 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 ACBD6Q9BR61 282 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 DRC3Q9H069 523 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 RASSF10A6NK89 507 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 H0Y626 953 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 HAUS5O94927 633 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 SNAI1O95863 264 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 CSH1P0DML2 217 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 CSH2P0DML3 217 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 HOXB8P17481 243 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 IRAK1P51617 712 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 SEC24CP53992 1094 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 SPANXN3Q5MJ09 141 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 PPP1R26Q5T8A7 1209 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 LRRC8DQ7L1W4 858 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 SLC26A9Q7LBE3 791 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 NUP93Q8N1F7 819 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 TMEM174Q8WUU8 243 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 BORCS6Q96GS4 357 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 SENP6Q9GZR1 1112 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 GGT7Q9UJ14 662 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 ZFP69BQ9UJL9 534 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 MAP2K7O14733 419 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 PEX10O60683 326 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 NDUFS3O75489 264 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 RHOCP08134 193 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 LSP1P33241 339 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 HOXD13P35453 343 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 USP10Q14694 798 aaKnown RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 SLC25A52Q3SY17 297 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 ACCSLQ4AC99 568 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 MRNIPQ6NTE8 343 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 TAPT1Q6NXT6 567 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 ST13P4Q8IZP2 240 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 PRELID2Q8N945 189 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 C12orf50Q8NA57 414 aaPredicted RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 SLC4A11Q8NBS3 891 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 C2orf15Q8WU43 125 aaKnown RBP12.51□□□□□ -0.41
SMAD9-201ENST00000350148 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 CNTN3Q9P232 1028 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 DNPEPQ9ULA0 475 aa12.51□□□□□ -0.41
SMAD9-201ENST00000350148 TM9SF1O15321 606 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 SPAG7O75391 227 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 VNN1O95497 513 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 SERPINB8P50452 374 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 CDH17Q12864 832 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 ZBTB41Q5SVQ8 909 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 DUPD1Q68J44 220 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 UGT3A1Q6NUS8 523 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 LRRC15Q8TF66 581 aa12.5□□□□□ -0.41
SMAD9-201ENST00000350148 THOC1Q96FV9 657 aaKnown RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 SRPK1Q96SB4 655 aaKnown RBP12.5□□□□□ -0.41
SMAD9-201ENST00000350148 SLC13A1Q9BZW2 595 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms